Analysis of interatomic Contacts of Structural Units in PDB entry:
7S61

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7S61 entry

There are 5 chains in PDB entry 7S61 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 32	ASP 352
B	ARG 32	ASP 352
C	ARG 32	ASP 352
D	ARG 32	ASP 352
E	MET 1	LYS 1582

There are 77 helices in PDB entry 7S61. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	52	57	Right-handed alpha
Helix 2	AA2	A	59	65	Right-handed alpha
Helix 3	AA3	A	67	97	Right-handed alpha
Helix 4	AA4	A	116	129	Right-handed alpha
Helix 5	AA5	A	142	172	Right-handed alpha
Helix 6	AA6	A	177	179	Right-handed 310
Helix 7	AA7	A	305	307	Right-handed 310
Helix 8	AA8	B	52	57	Right-handed alpha
Helix 9	AA9	B	59	65	Right-handed alpha
Helix 10	AB1	B	67	97	Right-handed alpha
Helix 11	AB2	B	116	129	Right-handed alpha
Helix 12	AB3	B	142	172	Right-handed alpha
Helix 13	AB4	B	177	179	Right-handed 310
Helix 14	AB5	B	305	307	Right-handed 310
Helix 15	AB6	C	52	57	Right-handed alpha
Helix 16	AB7	C	59	65	Right-handed alpha
Helix 17	AB8	C	67	97	Right-handed alpha
Helix 18	AB9	C	116	129	Right-handed alpha
Helix 19	AC1	C	142	172	Right-handed alpha
Helix 20	AC2	C	177	179	Right-handed 310
Helix 21	AC3	C	305	307	Right-handed 310
Helix 22	AC4	D	52	57	Right-handed alpha
Helix 23	AC5	D	59	65	Right-handed alpha
Helix 24	AC6	D	67	97	Right-handed alpha
Helix 25	AC7	D	116	129	Right-handed alpha
Helix 26	AC8	D	142	172	Right-handed alpha
Helix 27	AC9	D	177	179	Right-handed 310
Helix 28	AD1	D	305	307	Right-handed 310
Helix 29	AD2	E	21	24	Right-handed 310
Helix 30	AD3	E	25	34	Right-handed alpha
Helix 31	AD4	E	34	52	Right-handed alpha
Helix 32	AD5	E	71	98	Right-handed alpha
Helix 33	AD6	E	108	129	Right-handed alpha
Helix 34	AD7	E	137	161	Right-handed alpha
Helix 35	AD8	E	167	193	Right-handed alpha
Helix 36	AD9	E	224	230	Right-handed alpha
Helix 37	AE1	E	234	242	Right-handed alpha
Helix 38	AE2	E	285	313	Right-handed alpha
Helix 39	AE3	E	316	328	Right-handed alpha
Helix 40	AE4	E	348	353	Right-handed alpha
Helix 41	AE5	E	355	401	Right-handed alpha
Helix 42	AE6	E	405	410	Right-handed alpha
Helix 43	AE7	E	414	457	Right-handed alpha
Helix 44	AE8	E	459	465	Right-handed alpha
Helix 45	AE9	E	465	506	Right-handed alpha
Helix 46	AF1	E	506	513	Right-handed alpha
Helix 47	AF2	E	515	565	Right-handed alpha
Helix 48	AF3	E	573	589	Right-handed alpha
Helix 49	AF4	E	593	615	Right-handed alpha
Helix 50	AF5	E	721	728	Right-handed alpha
Helix 51	AF6	E	783	790	Right-handed alpha
Helix 52	AF7	E	795	806	Right-handed alpha
Helix 53	AF8	E	832	844	Right-handed alpha
Helix 54	AF9	E	861	871	Right-handed alpha
Helix 55	AG1	E	875	880	Right-handed alpha
Helix 56	AG2	E	913	920	Right-handed alpha
Helix 57	AG3	E	921	932	Right-handed alpha
Helix 58	AG4	E	998	1009	Right-handed alpha
Helix 59	AG5	E	1009	1039	Right-handed alpha
Helix 60	AG6	E	1062	1097	Right-handed alpha
Helix 61	AG7	E	1100	1106	Right-handed alpha
Helix 62	AG8	E	1109	1116	Right-handed alpha
Helix 63	AG9	E	1117	1135	Right-handed alpha
Helix 64	AH1	E	1135	1161	Right-handed alpha
Helix 65	AH2	E	1162	1210	Right-handed alpha
Helix 66	AH3	E	1210	1218	Right-handed alpha
Helix 67	AH4	E	1219	1274	Right-handed alpha
Helix 68	AH5	E	1280	1320	Right-handed alpha
Helix 69	AH6	E	1384	1391	Right-handed alpha
Helix 70	AH7	E	1414	1422	Right-handed alpha
Helix 71	AH8	E	1436	1441	Right-handed alpha
Helix 72	AH9	E	1447	1457	Right-handed alpha
Helix 73	AI1	E	1460	1466	Right-handed alpha
Helix 74	AI2	E	1483	1498	Right-handed alpha
Helix 75	AI3	E	1513	1528	Right-handed alpha
Helix 76	AI4	E	1562	1570	Right-handed alpha
Helix 77	AI5	E	1572	1582	Right-handed alpha

There are 26 sheets in PDB entry 7S61. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	183	first strand
Strand 2	A	195	204	anti-parallel
Strand 3	A	255	260	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	183	first strand
Strand 2	A	195	204	anti-parallel
Strand 3	A	187	192	anti-parallel
Strand 4	A	309	311	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	238	first strand
Strand 2	A	210	224	anti-parallel
Strand 3	A	282	291	anti-parallel
Strand 4	A	297	304	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	315	first strand
Strand 2	A	336	338	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	322	first strand
Strand 2	A	325	328	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	183	first strand
Strand 2	B	195	204	anti-parallel
Strand 3	B	255	260	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	183	first strand
Strand 2	B	195	204	anti-parallel
Strand 3	B	187	192	anti-parallel
Strand 4	B	309	311	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	230	238	first strand
Strand 2	B	210	224	anti-parallel
Strand 3	B	282	291	anti-parallel
Strand 4	B	297	304	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	315	first strand
Strand 2	B	336	338	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	319	322	first strand
Strand 2	B	325	328	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	183	first strand
Strand 2	C	195	204	anti-parallel
Strand 3	C	255	260	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	183	first strand
Strand 2	C	195	204	anti-parallel
Strand 3	C	187	192	anti-parallel
Strand 4	C	309	311	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	230	238	first strand
Strand 2	C	210	224	anti-parallel
Strand 3	C	282	291	anti-parallel
Strand 4	C	297	304	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	315	first strand
Strand 2	C	336	338	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	319	322	first strand
Strand 2	C	325	328	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	183	first strand
Strand 2	D	195	204	anti-parallel
Strand 3	D	255	260	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	183	first strand
Strand 2	D	195	204	anti-parallel
Strand 3	D	187	192	anti-parallel
Strand 4	D	309	311	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	230	238	first strand
Strand 2	D	210	224	anti-parallel
Strand 3	D	282	291	anti-parallel
Strand 4	D	297	304	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	315	first strand
Strand 2	D	336	338	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	319	322	first strand
Strand 2	D	325	328	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	678	680	first strand
Strand 2	E	704	705	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	697	701	first strand
Strand 2	E	683	688	anti-parallel
Strand 3	E	732	733	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	771	773	first strand
Strand 2	E	850	853	parallel
Strand 3	E	883	887	parallel
Strand 4	E	709	713	parallel
Strand 5	E	899	904	parallel
Strand 6	E	907	912	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1365	1369	first strand
Strand 2	E	1345	1353	anti-parallel
Strand 3	E	1397	1405	anti-parallel
Strand 4	E	1408	1409	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1423	1425	first strand
Strand 2	E	1502	1505	parallel
Strand 3	E	1532	1536	parallel
Strand 4	E	1374	1379	parallel
Strand 5	E	1548	1553	parallel
Strand 6	E	1556	1561	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1434	1435	first strand
Strand 2	E	1474	1475	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7S61

Analysis of interatomic Contacts of Structural Units in PDB entry:
7S61