Analysis of interatomic Contacts of Structural Units in PDB entry:
7S68


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S68 entry

There are 4 chains in PDB entry 7S68 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
M
 G 1 C 10
N
 G 17 C 26
B
 ALA 532SER 776
A
 SER 5PRO 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7S68. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
534 538Right-handed 310
Helix 2
AA2
B
608 623Right-handed alpha
Helix 3
AA3
B
680 696Right-handed alpha
Helix 4
AA4
B
702 723Right-handed alpha
Helix 5
AA5
B
725 740Right-handed alpha
Helix 6
AA6
B
754 775Right-handed alpha
Helix 7
AA7
A
66 70Right-handed alpha
Helix 8
AA8
A
78 89Right-handed alpha
Helix 9
AA9
A
225 256Right-handed alpha
Helix 10
AB1
A
257 268Right-handed alpha
Helix 11
AB2
A
275 289Right-handed alpha
Helix 12
AB3
A
341 346Right-handed alpha
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There are 5 sheets in PDB entry 7S68. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
543 545first strand
Strand 2
B
566 577anti-parallel
Strand 3
B
583 591anti-parallel
Strand 4
B
599 603anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
543 545first strand
Strand 2
B
566 577anti-parallel
Strand 3
B
554 561anti-parallel
Strand 4
B
639 640anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 53first strand
Strand 2
A
33 40anti-parallel
Strand 3
A
9 13anti-parallel
Strand 4
A
71 72parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 292first strand
Strand 2
A
330 331anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 304first strand
Strand 2
A
309 311anti-parallel
Strand 3
A
324 325anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il