Analysis of interatomic Contacts of Structural Units in PDB entry:
7S6B

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7S6B entry

There is 1 chain in PDB entry 7S6B (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 14	GLN 714

There are126 helices in PDB entry 7S6B. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	37	Right-handed alpha
Helix 2	AA2	A	55	65	Right-handed alpha
Helix 3	AA3	A	111	115	Right-handed 310
Helix 4	AA4	A	117	124	Right-handed alpha
Helix 5	AA5	A	125	142	Right-handed alpha
Helix 6	AA6	A	145	150	Right-handed 310
Helix 7	AA7	A	176	184	Right-handed alpha
Helix 8	AA8	A	187	198	Right-handed alpha
Helix 9	AA9	A	208	210	Right-handed 310
Helix 10	AB1	A	211	226	Right-handed alpha
Helix 11	AB2	A	243	252	Right-handed alpha
Helix 12	AB3	A	285	291	Right-handed alpha
Helix 13	AB4	A	317	333	Right-handed alpha
Helix 14	AB5	A	335	339	Right-handed 310
Helix 15	AB6	A	351	365	Right-handed alpha
Helix 16	AB7	A	379	384	Right-handed alpha
Helix 17	AB8	A	386	388	Right-handed 310
Helix 18	AB9	A	389	405	Right-handed alpha
Helix 19	AC1	A	421	425	Right-handed 310
Helix 20	AC2	A	487	504	Right-handed alpha
Helix 21	AC3	A	509	520	Right-handed alpha
Helix 22	AC4	A	537	548	Right-handed alpha
Helix 23	AC5	A	580	587	Right-handed alpha
Helix 24	AC6	A	587	603	Right-handed alpha
Helix 25	AC7	A	608	615	Right-handed alpha
Helix 26	AC8	A	624	646	Right-handed alpha
Helix 27	AC9	A	658	667	Right-handed alpha
Helix 28	AD1	A	671	686	Right-handed alpha
Helix 29	AD2	A	687	690	Right-handed 310
Helix 30	AD3	A	701	710	Right-handed alpha
Helix 31	AD4	A	711	714	Right-handed 310
Helix 32	AD5	A	733	747	Right-handed alpha
Helix 33	AD6	A	761	766	Right-handed 310
Helix 34	AD7	A	767	775	Right-handed alpha
Helix 35	AD8	A	797	801	Right-handed 310
Helix 36	AD9	A	802	812	Right-handed alpha
Helix 37	AE1	A	815	825	Right-handed alpha
Helix 38	AE2	A	840	852	Right-handed alpha
Helix 39	AE3	A	867	881	Right-handed alpha
Helix 40	AE4	A	886	892	Right-handed alpha
Helix 41	AE5	B	9	34	Right-handed alpha
Helix 42	AE6	B	35	38	Right-handed 310
Helix 43	AE7	B	55	65	Right-handed alpha
Helix 44	AE8	B	117	123	Right-handed alpha
Helix 45	AE9	B	125	142	Right-handed alpha
Helix 46	AF1	B	145	150	Right-handed 310
Helix 47	AF2	B	176	184	Right-handed alpha
Helix 48	AF3	B	187	198	Right-handed alpha
Helix 49	AF4	B	208	210	Right-handed 310
Helix 50	AF5	B	211	226	Right-handed alpha
Helix 51	AF6	B	285	292	Right-handed alpha
Helix 52	AF7	B	317	333	Right-handed alpha
Helix 53	AF8	B	335	339	Right-handed 310
Helix 54	AF9	B	351	365	Right-handed alpha
Helix 55	AG1	B	379	384	Right-handed alpha
Helix 56	AG2	B	386	388	Right-handed 310
Helix 57	AG3	B	389	405	Right-handed alpha
Helix 58	AG4	B	421	425	Right-handed 310
Helix 59	AG5	B	487	505	Right-handed alpha
Helix 60	AG6	B	509	520	Right-handed alpha
Helix 61	AG7	B	537	548	Right-handed alpha
Helix 62	AG8	B	580	587	Right-handed alpha
Helix 63	AG9	B	587	602	Right-handed alpha
Helix 64	AH1	B	608	615	Right-handed alpha
Helix 65	AH2	B	624	646	Right-handed alpha
Helix 66	AH3	B	658	667	Right-handed alpha
Helix 67	AH4	B	671	686	Right-handed alpha
Helix 68	AH5	B	687	690	Right-handed 310
Helix 69	AH6	B	701	709	Right-handed alpha
Helix 70	AH7	B	710	714	Right-handed 310
Helix 71	AH8	B	733	746	Right-handed alpha
Helix 72	AH9	B	761	766	Right-handed 310
Helix 73	AI1	B	767	775	Right-handed alpha
Helix 74	AI2	B	797	801	Right-handed 310
Helix 75	AI3	B	802	812	Right-handed alpha
Helix 76	AI4	B	816	826	Right-handed alpha
Helix 77	AI5	B	840	852	Right-handed alpha
Helix 78	AI6	B	867	881	Right-handed alpha
Helix 79	AI7	B	886	892	Right-handed alpha
Helix 80	AI8	C	926	938	Right-handed alpha
Helix 81	AI9	C	939	947	Right-handed alpha
Helix 82	AJ1	C	955	978	Right-handed alpha
Helix 83	AJ2	C	1012	1025	Right-handed alpha
Helix 84	AJ3	C	1034	1039	Right-handed alpha
Helix 85	AJ4	C	1040	1053	Right-handed alpha
Helix 86	AJ5	C	1065	1068	Right-handed 310
Helix 87	AJ6	C	1080	1096	Right-handed alpha
Helix 88	AJ7	C	1119	1136	Right-handed alpha
Helix 89	AJ8	C	1151	1164	Right-handed alpha
Helix 90	AJ9	C	1210	1224	Right-handed alpha
Helix 91	AK1	C	1234	1238	Right-handed 310
Helix 92	AK2	C	1240	1249	Right-handed alpha
Helix 93	AK3	C	1250	1252	Right-handed 310
Helix 94	AK4	C	1264	1275	Right-handed alpha
Helix 95	AK5	C	1301	1313	Right-handed alpha
Helix 96	AK6	C	1313	1323	Right-handed alpha
Helix 97	AK7	C	1336	1341	Right-handed alpha
Helix 98	AK8	C	1349	1366	Right-handed alpha
Helix 99	AK9	C	1401	1415	Right-handed alpha
Helix 100	AL1	C	1426	1438	Right-handed alpha
Helix 101	AL2	C	1446	1454	Right-handed alpha
Helix 102	AL3	D	926	938	Right-handed alpha
Helix 103	AL4	D	939	946	Right-handed alpha
Helix 104	AL5	D	955	978	Right-handed alpha
Helix 105	AL6	D	1012	1024	Right-handed alpha
Helix 106	AL7	D	1034	1040	Right-handed alpha
Helix 107	AL8	D	1040	1052	Right-handed alpha
Helix 108	AL9	D	1065	1068	Right-handed 310
Helix 109	AM1	D	1079	1096	Right-handed alpha
Helix 110	AM2	D	1119	1136	Right-handed alpha
Helix 111	AM3	D	1151	1163	Right-handed alpha
Helix 112	AM4	D	1211	1223	Right-handed alpha
Helix 113	AM5	D	1234	1238	Right-handed 310
Helix 114	AM6	D	1240	1251	Right-handed alpha
Helix 115	AM7	D	1264	1275	Right-handed alpha
Helix 116	AM8	D	1296	1300	Right-handed 310
Helix 117	AM9	D	1301	1323	Right-handed alpha
Helix 118	AN1	D	1337	1341	Right-handed alpha
Helix 119	AN2	D	1349	1366	Right-handed alpha
Helix 120	AN3	D	1401	1414	Right-handed alpha
Helix 121	AN4	D	1426	1438	Right-handed alpha
Helix 122	AN5	D	1446	1455	Right-handed alpha
Helix 123	AN6	E	1483	1501	Right-handed alpha
Helix 124	AN7	E	1525	1541	Right-handed alpha
Helix 125	AN8	E	1547	1552	Right-handed alpha
Helix 126	AN9	E	1554	1567	Right-handed alpha

There are 19 sheets in PDB entry 7S6B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 22 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	427	429	first strand
Strand 2	A	374	377	parallel
Strand 3	A	341	343	parallel
Strand 4	A	444	449	parallel
Strand 5	A	455	463	anti-parallel
Strand 6	A	297	306	anti-parallel
Strand 7	A	40	48	anti-parallel
Strand 8	A	276	284	anti-parallel
Strand 9	A	231	238	anti-parallel
Strand 10	A	154	159	parallel
Strand 11	A	203	207	parallel
Strand 12	B	203	207	anti-parallel
Strand 13	B	154	159	parallel
Strand 14	B	231	238	parallel
Strand 15	B	276	284	anti-parallel
Strand 16	B	40	48	anti-parallel
Strand 17	B	297	306	anti-parallel
Strand 18	B	455	463	anti-parallel
Strand 19	B	444	449	anti-parallel
Strand 20	B	341	343	parallel
Strand 21	B	374	377	parallel
Strand 22	B	427	429	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	72	first strand
Strand 2	A	99	100	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	109	first strand
Strand 2	A	908	909	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	406	407	first strand
Strand 2	A	434	435	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	481	485	first strand
Strand 2	A	526	530	anti-parallel
Strand 3	A	554	558	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	795	796	first strand
Strand 2	A	787	788	anti-parallel
Strand 3	A	652	655	parallel
Strand 4	A	564	569	parallel
Strand 5	A	828	833	parallel
Strand 6	A	856	858	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	716	723	first strand
Strand 2	A	726	732	anti-parallel
Strand 3	A	693	698	anti-parallel
Strand 4	A	750	753	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	72	first strand
Strand 2	B	99	100	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	109	first strand
Strand 2	B	908	909	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	406	407	first strand
Strand 2	B	434	435	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	481	485	first strand
Strand 2	B	526	530	anti-parallel
Strand 3	B	554	558	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	787	788	first strand
Strand 2	B	652	655	parallel
Strand 3	B	564	569	parallel
Strand 4	B	828	833	parallel
Strand 5	B	856	858	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	750	752	first strand
Strand 2	B	693	698	anti-parallel
Strand 3	B	726	732	anti-parallel
Strand 4	B	716	723	anti-parallel
Strand 5	B	814	815	parallel

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There are 15 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1027	1033	first strand
Strand 2	C	999	1005	parallel
Strand 3	C	1060	1063	parallel
Strand 4	C	1100	1106	parallel
Strand 5	C	1140	1146	parallel
Strand 6	C	1170	1173	parallel
Strand 7	C	1178	1185	anti-parallel
Strand 8	C	980	988	anti-parallel
Strand 9	C	1421	1422	anti-parallel
Strand 10	C	1371	1375	parallel
Strand 11	C	1330	1334	parallel
Strand 12	C	1282	1287	parallel
Strand 13	C	1202	1206	parallel
Strand 14	C	1227	1232	parallel
Strand 15	C	1254	1255	parallel

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There are 15 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1027	1033	first strand
Strand 2	C	999	1005	parallel
Strand 3	C	1060	1063	parallel
Strand 4	C	1100	1106	parallel
Strand 5	C	1140	1146	parallel
Strand 6	C	1170	1173	parallel
Strand 7	C	1178	1185	anti-parallel
Strand 8	C	980	988	anti-parallel
Strand 9	C	1421	1422	anti-parallel
Strand 10	C	1371	1375	parallel
Strand 11	C	1330	1334	parallel
Strand 12	C	1282	1287	parallel
Strand 13	C	1202	1206	parallel
Strand 14	C	1227	1232	parallel
Strand 15	C	1258	1259	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1071	1072	first strand
Strand 2	C	1075	1079	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1397	1398	first strand
Strand 2	C	1424	1425	anti-parallel

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There are 15 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1027	1033	first strand
Strand 2	D	999	1005	parallel
Strand 3	D	1060	1063	parallel
Strand 4	D	1100	1106	parallel
Strand 5	D	1140	1146	parallel
Strand 6	D	1170	1173	parallel
Strand 7	D	1178	1185	anti-parallel
Strand 8	D	980	988	anti-parallel
Strand 9	D	1421	1422	anti-parallel
Strand 10	D	1370	1375	parallel
Strand 11	D	1330	1336	parallel
Strand 12	D	1282	1287	parallel
Strand 13	D	1202	1206	parallel
Strand 14	D	1227	1232	parallel
Strand 15	D	1254	1259	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1397	1398	first strand
Strand 2	D	1424	1425	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7S6B

Analysis of interatomic Contacts of Structural Units in PDB entry:
7S6B