Analysis of interatomic Contacts of Structural Units in PDB entry:
7S6F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S6F entry

There is 1 chain in PDB entry 7S6F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 11LYS 405
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7S6F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 49Right-handed alpha
Helix 2
AA2
A
71 85Right-handed alpha
Helix 3
AA3
A
96 110Right-handed alpha
Helix 4
AA4
A
135 138Right-handed 310
Helix 5
AA5
A
139 150Right-handed alpha
Helix 6
AA6
A
165 183Right-handed alpha
Helix 7
AA7
A
199 210Right-handed alpha
Helix 8
AA8
A
223 235Right-handed alpha
Helix 9
AA9
A
238 241Right-handed 310
Helix 10
AB1
A
251 259Right-handed alpha
Helix 11
AB2
A
260 263Right-handed 310
Helix 12
AB3
A
278 293Right-handed alpha
Helix 13
AB4
A
299 320Right-handed alpha
Helix 14
AB5
A
323 332Right-handed alpha
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There are 4 sheets in PDB entry 7S6F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
57 67anti-parallel
Strand 3
A
14 22parallel
Strand 4
A
91 93parallel
Strand 5
A
114 116parallel
Strand 6
A
129 131parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 192first strand
Strand 2
A
158 163parallel
Strand 3
A
214 219parallel
Strand 4
A
243 247parallel
Strand 5
A
267 270parallel
Strand 6
A
356 360anti-parallel
Strand 7
A
366 371anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 338first strand
Strand 2
A
341 345anti-parallel
Strand 3
A
351 352anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 394first strand
Strand 2
A
401 404anti-parallel
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