Analysis of interatomic Contacts of Structural Units in PDB entry:
7S6V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S6V entry

There are 2 chains in PDB entry 7S6V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 185
A
 ILE 187VAL 353
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7S6V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 8Right-handed 310
Helix 2
AA2
A
10 18Right-handed alpha
Helix 3
AA3
A
60 70Right-handed alpha
Helix 4
AA4
A
107 116Right-handed alpha
Helix 5
AA5
A
122 141Right-handed alpha
Helix 6
AA6
A
189 193Right-handed 310
Helix 7
AA7
A
194 199Right-handed alpha
Helix 8
AA8
A
206 223Right-handed alpha
Helix 9
AA9
A
231 244Right-handed alpha
Helix 10
AB1
A
247 255Right-handed alpha
Helix 11
AB2
A
270 276Right-handed alpha
Helix 12
AB3
A
282 294Right-handed alpha
Helix 13
AB4
A
297 301Right-handed 310
Helix 14
AB5
A
303 308Right-handed alpha
Helix 15
AB6
A
309 318Right-handed 310
Helix 16
AB7
A
337 342Right-handed alpha
Helix 17
AB8
A
345 353Right-handed alpha
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There are 2 sheets in PDB entry 7S6V. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 29first strand
Strand 2
A
32 39anti-parallel
Strand 3
A
45 51anti-parallel
Strand 4
A
94 101anti-parallel
Strand 5
A
79 86anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 106first strand
Strand 2
A
157 160anti-parallel
Strand 3
A
165 168anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il