Analysis of interatomic Contacts of Structural Units in PDB entry:
7S7B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S7B entry

There are 8 chains in PDB entry 7S7B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 96LEU 1042
B
 ASP 46LYS 701
C
 GLU 7ARG 85
D
 U 26 A 46
E
 MET 96LEU 1042
F
 ASP 46LYS 701
G
 GLU 7ARG 85
H
 U 26 A 46
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are107 helices in PDB entry 7S7B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
141 153Right-handed alpha
Helix 2
AA2
A
167 181Right-handed alpha
Helix 3
AA3
A
191 206Right-handed alpha
Helix 4
AA4
A
229 239Right-handed alpha
Helix 5
AA5
A
240 244Right-handed 310
Helix 6
AA6
A
253 259Right-handed 310
Helix 7
AA7
A
263 273Right-handed alpha
Helix 8
AA8
A
288 301Right-handed alpha
Helix 9
AA9
A
339 356Right-handed alpha
Helix 10
AB1
A
372 384Right-handed alpha
Helix 11
AB2
A
395 406Right-handed alpha
Helix 12
AB3
A
413 429Right-handed alpha
Helix 13
AB4
A
432 437Right-handed alpha
Helix 14
AB5
A
438 451Right-handed alpha
Helix 15
AB6
A
460 473Right-handed alpha
Helix 16
AB7
A
483 488Right-handed 310
Helix 17
AB8
A
513 522Right-handed alpha
Helix 18
AB9
A
544 554Right-handed alpha
Helix 19
AC1
A
566 576Right-handed alpha
Helix 20
AC2
A
580 588Right-handed alpha
Helix 21
AC3
A
590 615Right-handed alpha
Helix 22
AC4
A
619 645Right-handed alpha
Helix 23
AC5
A
646 651Right-handed alpha
Helix 24
AC6
A
652 654Right-handed 310
Helix 25
AC7
A
754 770Right-handed alpha
Helix 26
AC8
A
787 806Right-handed alpha
Helix 27
AC9
A
814 843Right-handed alpha
Helix 28
AD1
A
847 861Right-handed alpha
Helix 29
AD2
A
871 880Right-handed alpha
Helix 30
AD3
A
885 894Right-handed alpha
Helix 31
AD4
A
901 913Right-handed alpha
Helix 32
AD5
A
929 949Right-handed alpha
Helix 33
AD6
A
954 962Right-handed alpha
Helix 34
AD7
A
966 976Right-handed alpha
Helix 35
AD8
A
978 984Right-handed alpha
Helix 36
AD9
A
989 1015Right-handed alpha
Helix 37
AE1
A
1016 1030Right-handed alpha
Helix 38
AE2
B
47 74Right-handed alpha
Helix 39
AE3
B
102 130Right-handed alpha
Helix 40
AE4
B
158 166Right-handed alpha
Helix 41
AE5
B
238 242Right-handed 310
Helix 42
AE6
B
277 281Right-handed 310
Helix 43
AE7
B
292 300Right-handed alpha
Helix 44
AE8
B
307 317Right-handed alpha
Helix 45
AE9
B
319 326Right-handed alpha
Helix 46
AF1
B
361 364Right-handed 310
Helix 47
AF2
B
395 403Right-handed alpha
Helix 48
AF3
B
662 667Right-handed alpha
Helix 49
AF4
B
683 692Right-handed alpha
Helix 50
AF5
B
695 700Right-handed alpha
Helix 51
AF6
C
22 34Right-handed alpha
Helix 52
AF7
C
61 70Right-handed alpha
Helix 53
AF8
E
141 153Right-handed alpha
Helix 54
AF9
E
167 181Right-handed alpha
Helix 55
AG1
E
191 207Right-handed alpha
Helix 56
AG2
E
229 239Right-handed alpha
Helix 57
AG3
E
241 245Right-handed alpha
Helix 58
AG4
E
254 259Right-handed 310
Helix 59
AG5
E
263 273Right-handed alpha
Helix 60
AG6
E
288 301Right-handed alpha
Helix 61
AG7
E
339 356Right-handed alpha
Helix 62
AG8
E
372 384Right-handed alpha
Helix 63
AG9
E
395 406Right-handed alpha
Helix 64
AH1
E
413 429Right-handed alpha
Helix 65
AH2
E
432 437Right-handed alpha
Helix 66
AH3
E
438 451Right-handed alpha
Helix 67
AH4
E
460 473Right-handed alpha
Helix 68
AH5
E
483 488Right-handed 310
Helix 69
AH6
E
513 522Right-handed alpha
Helix 70
AH7
E
544 554Right-handed alpha
Helix 71
AH8
E
566 576Right-handed alpha
Helix 72
AH9
E
580 588Right-handed alpha
Helix 73
AI1
E
590 615Right-handed alpha
Helix 74
AI2
E
619 645Right-handed alpha
Helix 75
AI3
E
646 651Right-handed alpha
Helix 76
AI4
E
652 654Right-handed 310
Helix 77
AI5
E
752 770Right-handed alpha
Helix 78
AI6
E
787 807Right-handed alpha
Helix 79
AI7
E
807 812Right-handed alpha
Helix 80
AI8
E
814 843Right-handed alpha
Helix 81
AI9
E
847 861Right-handed alpha
Helix 82
AJ1
E
871 880Right-handed alpha
Helix 83
AJ2
E
885 894Right-handed alpha
Helix 84
AJ3
E
895 899Right-handed 310
Helix 85
AJ4
E
901 913Right-handed alpha
Helix 86
AJ5
E
929 949Right-handed alpha
Helix 87
AJ6
E
954 962Right-handed alpha
Helix 88
AJ7
E
966 976Right-handed alpha
Helix 89
AJ8
E
978 984Right-handed alpha
Helix 90
AJ9
E
989 1015Right-handed alpha
Helix 91
AK1
E
1016 1030Right-handed alpha
Helix 92
AK2
F
47 75Right-handed alpha
Helix 93
AK3
F
76 78Right-handed 310
Helix 94
AK4
F
102 108Right-handed alpha
Helix 95
AK5
F
108 130Right-handed alpha
Helix 96
AK6
F
158 166Right-handed alpha
Helix 97
AK7
F
278 282Right-handed 310
Helix 98
AK8
F
292 300Right-handed alpha
Helix 99
AK9
F
307 317Right-handed alpha
Helix 100
AL1
F
320 326Right-handed alpha
Helix 101
AL2
F
361 364Right-handed 310
Helix 102
AL3
F
395 403Right-handed alpha
Helix 103
AL4
F
662 667Right-handed alpha
Helix 104
AL5
F
683 692Right-handed alpha
Helix 105
AL6
F
695 700Right-handed alpha
Helix 106
AL7
G
22 34Right-handed alpha
Helix 107
AL8
G
61 70Right-handed alpha
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There are 15 sheets in PDB entry 7S7B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 102first strand
Strand 2
A
111 117anti-parallel
Strand 3
A
304 309anti-parallel
Strand 4
A
156 161parallel
Strand 5
A
278 281parallel
Strand 6
A
246 251parallel
Strand 7
A
184 189parallel
Strand 8
A
224 228parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 212first strand
Strand 2
A
217 218anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
453 455first strand
Strand 2
A
478 481parallel
Strand 3
A
389 392parallel
Strand 4
A
495 498parallel
Strand 5
A
533 539parallel
Strand 6
A
316 322parallel
Strand 7
A
327 332anti-parallel
Strand 8
B
334 336parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
502 504first strand
Strand 2
A
509 511anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
727 732first strand
Strand 2
A
694 700anti-parallel
Strand 3
A
667 679anti-parallel
Strand 4
A
659 664anti-parallel
Strand 5
A
736 739anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 182first strand
Strand 2
B
168 174anti-parallel
Strand 3
F
95 100anti-parallel
Strand 4
B
96 100anti-parallel
Strand 5
F
168 174anti-parallel
Strand 6
F
178 182anti-parallel
Strand 7
E
743 744anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 328first strand
Strand 2
B
358 359anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
36 40first strand
Strand 2
C
53 57anti-parallel
Strand 3
C
11 15anti-parallel
Strand 4
C
81 83anti-parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
99 102first strand
Strand 2
E
111 117anti-parallel
Strand 3
E
304 309anti-parallel
Strand 4
E
156 161parallel
Strand 5
E
278 283parallel
Strand 6
E
246 252parallel
Strand 7
E
184 189parallel
Strand 8
E
224 228parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
211 212first strand
Strand 2
E
217 218anti-parallel
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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
453 455first strand
Strand 2
E
478 481parallel
Strand 3
E
389 392parallel
Strand 4
E
495 498parallel
Strand 5
E
533 539parallel
Strand 6
E
316 322parallel
Strand 7
E
327 332anti-parallel
Strand 8
F
334 336parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
502 504first strand
Strand 2
E
509 511anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
727 732first strand
Strand 2
E
694 700anti-parallel
Strand 3
E
667 679anti-parallel
Strand 4
E
659 664anti-parallel
Strand 5
E
736 739anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
327 328first strand
Strand 2
F
358 359anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
36 40first strand
Strand 2
G
52 57anti-parallel
Strand 3
G
11 15anti-parallel
Strand 4
G
78 83anti-parallel
Strand 5
G
73 75anti-parallel
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