Analysis of interatomic Contacts of Structural Units in PDB entry:
7S7C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S7C entry

There are 7 chains in PDB entry 7S7C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 96LEU 1042
B
 GLU 66ASN 702
C
 GLU 7ARG 85
D
 G 1 A 30
L
 G 1 C 10
E
 GLN 632ALA 799
F
 CYS 56GLN 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 7S7C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
141 153Right-handed alpha
Helix 2
AA2
A
163 166Right-handed 310
Helix 3
AA3
A
167 181Right-handed alpha
Helix 4
AA4
A
191 207Right-handed alpha
Helix 5
AA5
A
229 238Right-handed alpha
Helix 6
AA6
A
240 245Right-handed 310
Helix 7
AA7
A
254 259Right-handed 310
Helix 8
AA8
A
264 273Right-handed alpha
Helix 9
AA9
A
288 301Right-handed alpha
Helix 10
AB1
A
339 356Right-handed alpha
Helix 11
AB2
A
373 385Right-handed alpha
Helix 12
AB3
A
397 406Right-handed alpha
Helix 13
AB4
A
413 429Right-handed alpha
Helix 14
AB5
A
432 437Right-handed alpha
Helix 15
AB6
A
438 443Right-handed alpha
Helix 16
AB7
A
444 450Right-handed alpha
Helix 17
AB8
A
460 474Right-handed alpha
Helix 18
AB9
A
483 488Right-handed 310
Helix 19
AC1
A
513 522Right-handed alpha
Helix 20
AC2
A
544 553Right-handed alpha
Helix 21
AC3
A
566 576Right-handed alpha
Helix 22
AC4
A
580 587Right-handed alpha
Helix 23
AC5
A
589 596Right-handed alpha
Helix 24
AC6
A
597 615Right-handed alpha
Helix 25
AC7
A
620 645Right-handed alpha
Helix 26
AC8
A
646 651Right-handed alpha
Helix 27
AC9
A
703 708Right-handed alpha
Helix 28
AD1
A
709 713Right-handed 310
Helix 29
AD2
A
752 769Right-handed alpha
Helix 30
AD3
A
787 807Right-handed alpha
Helix 31
AD4
A
807 812Right-handed alpha
Helix 32
AD5
A
815 842Right-handed alpha
Helix 33
AD6
A
847 862Right-handed alpha
Helix 34
AD7
A
871 880Right-handed alpha
Helix 35
AD8
A
884 895Right-handed alpha
Helix 36
AD9
A
901 910Right-handed alpha
Helix 37
AE1
A
928 948Right-handed alpha
Helix 38
AE2
A
954 960Right-handed alpha
Helix 39
AE3
A
966 974Right-handed alpha
Helix 40
AE4
A
978 984Right-handed alpha
Helix 41
AE5
A
989 1015Right-handed alpha
Helix 42
AE6
A
1017 1030Right-handed alpha
Helix 43
AE7
A
1033 1037Right-handed 310
Helix 44
AE8
B
67 75Right-handed alpha
Helix 45
AE9
B
76 78Right-handed 310
Helix 46
AF1
B
102 107Right-handed alpha
Helix 47
AF2
B
108 128Right-handed alpha
Helix 48
AF3
B
156 166Right-handed alpha
Helix 49
AF4
B
191 195Right-handed 310
Helix 50
AF5
B
238 242Right-handed 310
Helix 51
AF6
B
277 281Right-handed 310
Helix 52
AF7
B
292 300Right-handed alpha
Helix 53
AF8
B
308 317Right-handed alpha
Helix 54
AF9
B
320 326Right-handed alpha
Helix 55
AG1
B
395 403Right-handed alpha
Helix 56
AG2
B
662 667Right-handed alpha
Helix 57
AG3
B
683 692Right-handed alpha
Helix 58
AG4
B
695 702Right-handed alpha
Helix 59
AG5
C
22 32Right-handed alpha
Helix 60
AG6
C
62 70Right-handed alpha
Helix 61
AG7
E
633 645Right-handed alpha
Helix 62
AG8
E
646 651Right-handed alpha
Helix 63
AG9
E
652 654Right-handed 310
Helix 64
AH1
E
752 770Right-handed alpha
Helix 65
AH2
E
787 799Right-handed alpha
Helix 66
AH3
F
57 72Right-handed alpha
Helix 67
AH4
F
102 127Right-handed alpha
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There are 12 sheets in PDB entry 7S7C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 103first strand
Strand 2
A
113 117anti-parallel
Strand 3
A
304 309anti-parallel
Strand 4
A
156 161parallel
Strand 5
A
278 283parallel
Strand 6
A
248 252parallel
Strand 7
A
185 189parallel
Strand 8
A
224 228parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
453 455first strand
Strand 2
A
478 481parallel
Strand 3
A
389 392parallel
Strand 4
A
495 498parallel
Strand 5
A
533 539parallel
Strand 6
A
316 322parallel
Strand 7
A
328 330anti-parallel
Strand 8
B
335 336parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
502 504first strand
Strand 2
A
509 511anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
667 673first strand
Strand 2
A
658 664anti-parallel
Strand 3
A
736 743anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
676 680first strand
Strand 2
A
693 702anti-parallel
Strand 3
A
725 732anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 100first strand
Strand 2
F
167 174anti-parallel
Strand 3
F
178 182anti-parallel
Strand 4
E
743 744anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 100first strand
Strand 2
F
167 174anti-parallel
Strand 3
F
145 146anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 328first strand
Strand 2
B
358 359anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
36 40first strand
Strand 2
C
53 57anti-parallel
Strand 3
C
11 15anti-parallel
Strand 4
C
81 83anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
74 75first strand
Strand 2
C
78 79anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
727 732first strand
Strand 2
E
693 700anti-parallel
Strand 3
E
667 680anti-parallel
Strand 4
E
659 664anti-parallel
Strand 5
E
736 738anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
78 79first strand
Strand 2
F
148 149parallel
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