Analysis of interatomic Contacts of Structural Units in PDB entry:
7S8C

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7S8C entry

There are 4 chains in PDB entry 7S8C (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 27	ASP 638
B	GLU 27	ASP 638
C	GLU 27	ASP 638
D	GLU 27	ASP 638

There are128 helices in PDB entry 7S8C. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	27	46	Right-handed alpha
Helix 2	AA2	A	47	55	Right-handed alpha
Helix 3	AA3	A	57	68	Right-handed alpha
Helix 4	AA4	A	81	89	Right-handed alpha
Helix 5	AA5	A	91	102	Right-handed alpha
Helix 6	AA6	A	103	108	Right-handed 310
Helix 7	AA7	A	119	127	Right-handed alpha
Helix 8	AA8	A	129	138	Right-handed alpha
Helix 9	AA9	A	149	153	Right-handed 310
Helix 10	AB1	A	165	173	Right-handed alpha
Helix 11	AB2	A	175	184	Right-handed alpha
Helix 12	AB3	A	198	205	Right-handed alpha
Helix 13	AB4	A	208	222	Right-handed alpha
Helix 14	AB5	A	231	235	Right-handed 310
Helix 15	AB6	A	242	250	Right-handed alpha
Helix 16	AB7	A	252	261	Right-handed alpha
Helix 17	AB8	A	291	298	Right-handed alpha
Helix 18	AB9	A	302	310	Right-handed 310
Helix 19	AC1	A	312	324	Right-handed alpha
Helix 20	AC2	A	326	349	Right-handed alpha
Helix 21	AC3	A	372	377	Right-handed alpha
Helix 22	AC4	A	380	403	Right-handed alpha
Helix 23	AC5	A	403	409	Right-handed alpha
Helix 24	AC6	A	413	419	Right-handed alpha
Helix 25	AC7	A	424	445	Right-handed alpha
Helix 26	AC8	A	450	464	Right-handed alpha
Helix 27	AC9	A	465	470	Right-handed 310
Helix 28	AD1	A	475	488	Right-handed alpha
Helix 29	AD2	A	488	512	Right-handed alpha
Helix 30	AD3	A	525	538	Right-handed alpha
Helix 31	AD4	A	552	580	Right-handed alpha
Helix 32	AD5	A	585	608	Right-handed alpha
Helix 33	AD6	B	28	46	Right-handed alpha
Helix 34	AD7	B	47	55	Right-handed alpha
Helix 35	AD8	B	57	68	Right-handed alpha
Helix 36	AD9	B	81	89	Right-handed alpha
Helix 37	AE1	B	91	102	Right-handed alpha
Helix 38	AE2	B	103	108	Right-handed 310
Helix 39	AE3	B	119	127	Right-handed alpha
Helix 40	AE4	B	129	138	Right-handed alpha
Helix 41	AE5	B	149	153	Right-handed 310
Helix 42	AE6	B	165	173	Right-handed alpha
Helix 43	AE7	B	175	184	Right-handed alpha
Helix 44	AE8	B	198	205	Right-handed alpha
Helix 45	AE9	B	208	222	Right-handed alpha
Helix 46	AF1	B	231	235	Right-handed 310
Helix 47	AF2	B	242	250	Right-handed alpha
Helix 48	AF3	B	252	261	Right-handed alpha
Helix 49	AF4	B	291	298	Right-handed alpha
Helix 50	AF5	B	302	310	Right-handed 310
Helix 51	AF6	B	312	324	Right-handed alpha
Helix 52	AF7	B	326	349	Right-handed alpha
Helix 53	AF8	B	372	377	Right-handed alpha
Helix 54	AF9	B	380	403	Right-handed alpha
Helix 55	AG1	B	403	409	Right-handed alpha
Helix 56	AG2	B	413	419	Right-handed alpha
Helix 57	AG3	B	424	445	Right-handed alpha
Helix 58	AG4	B	450	464	Right-handed alpha
Helix 59	AG5	B	465	470	Right-handed 310
Helix 60	AG6	B	475	488	Right-handed alpha
Helix 61	AG7	B	488	512	Right-handed alpha
Helix 62	AG8	B	525	538	Right-handed alpha
Helix 63	AG9	B	552	580	Right-handed alpha
Helix 64	AH1	B	585	608	Right-handed alpha
Helix 65	AH2	C	28	46	Right-handed alpha
Helix 66	AH3	C	47	55	Right-handed alpha
Helix 67	AH4	C	57	68	Right-handed alpha
Helix 68	AH5	C	81	89	Right-handed alpha
Helix 69	AH6	C	91	102	Right-handed alpha
Helix 70	AH7	C	103	108	Right-handed 310
Helix 71	AH8	C	119	127	Right-handed alpha
Helix 72	AH9	C	129	138	Right-handed alpha
Helix 73	AI1	C	149	153	Right-handed 310
Helix 74	AI2	C	165	173	Right-handed alpha
Helix 75	AI3	C	175	184	Right-handed alpha
Helix 76	AI4	C	198	205	Right-handed alpha
Helix 77	AI5	C	208	222	Right-handed alpha
Helix 78	AI6	C	231	235	Right-handed 310
Helix 79	AI7	C	242	250	Right-handed alpha
Helix 80	AI8	C	252	261	Right-handed alpha
Helix 81	AI9	C	291	298	Right-handed alpha
Helix 82	AJ1	C	302	310	Right-handed 310
Helix 83	AJ2	C	312	324	Right-handed alpha
Helix 84	AJ3	C	326	349	Right-handed alpha
Helix 85	AJ4	C	372	377	Right-handed alpha
Helix 86	AJ5	C	380	403	Right-handed alpha
Helix 87	AJ6	C	403	409	Right-handed alpha
Helix 88	AJ7	C	413	419	Right-handed alpha
Helix 89	AJ8	C	424	445	Right-handed alpha
Helix 90	AJ9	C	450	464	Right-handed alpha
Helix 91	AK1	C	465	470	Right-handed 310
Helix 92	AK2	C	475	488	Right-handed alpha
Helix 93	AK3	C	488	512	Right-handed alpha
Helix 94	AK4	C	525	538	Right-handed alpha
Helix 95	AK5	C	552	580	Right-handed alpha
Helix 96	AK6	C	585	608	Right-handed alpha
Helix 97	AK7	D	28	46	Right-handed alpha
Helix 98	AK8	D	47	55	Right-handed alpha
Helix 99	AK9	D	57	68	Right-handed alpha
Helix 100	AL1	D	81	89	Right-handed alpha
Helix 101	AL2	D	91	102	Right-handed alpha
Helix 102	AL3	D	103	108	Right-handed 310
Helix 103	AL4	D	119	127	Right-handed alpha
Helix 104	AL5	D	129	138	Right-handed alpha
Helix 105	AL6	D	149	153	Right-handed 310
Helix 106	AL7	D	165	173	Right-handed alpha
Helix 107	AL8	D	175	184	Right-handed alpha
Helix 108	AL9	D	198	205	Right-handed alpha
Helix 109	AM1	D	208	222	Right-handed alpha
Helix 110	AM2	D	231	235	Right-handed 310
Helix 111	AM3	D	242	250	Right-handed alpha
Helix 112	AM4	D	252	261	Right-handed alpha
Helix 113	AM5	D	291	298	Right-handed alpha
Helix 114	AM6	D	302	310	Right-handed 310
Helix 115	AM7	D	312	324	Right-handed alpha
Helix 116	AM8	D	326	349	Right-handed alpha
Helix 117	AM9	D	372	377	Right-handed alpha
Helix 118	AN1	D	380	403	Right-handed alpha
Helix 119	AN2	D	403	409	Right-handed alpha
Helix 120	AN3	D	413	419	Right-handed alpha
Helix 121	AN4	D	424	445	Right-handed alpha
Helix 122	AN5	D	450	464	Right-handed alpha
Helix 123	AN6	D	465	470	Right-handed 310
Helix 124	AN7	D	475	488	Right-handed alpha
Helix 125	AN8	D	488	512	Right-handed alpha
Helix 126	AN9	D	525	538	Right-handed alpha
Helix 127	AO1	D	552	580	Right-handed alpha
Helix 128	AO2	D	585	608	Right-handed alpha

There are 8 sheets in PDB entry 7S8C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	264	270	first strand
Strand 2	A	273	278	anti-parallel
Strand 3	A	629	636	anti-parallel
Strand 4	A	618	619	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	354	first strand
Strand 2	A	368	370	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	264	270	first strand
Strand 2	B	273	278	anti-parallel
Strand 3	B	629	636	anti-parallel
Strand 4	B	618	619	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	352	354	first strand
Strand 2	B	368	370	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	264	270	first strand
Strand 2	C	273	278	anti-parallel
Strand 3	C	629	636	anti-parallel
Strand 4	C	618	619	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	352	354	first strand
Strand 2	C	368	370	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	264	270	first strand
Strand 2	D	273	278	anti-parallel
Strand 3	D	629	636	anti-parallel
Strand 4	D	618	619	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	352	354	first strand
Strand 2	D	368	370	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7S8C

Analysis of interatomic Contacts of Structural Units in PDB entry:
7S8C