Analysis of interatomic Contacts of Structural Units in PDB entry:
7S8G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S8G entry

There are 4 chains in PDB entry 7S8G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 GLN 3LYS 221
L
 ILE 1GLY 209
h
 GLN 3ARG 217
l
 ILE 1ALA 42
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7S8G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
87 91Right-handed 310
Helix 2
AA2
H
163 165Right-handed 310
Helix 3
AA3
H
194 199Right-handed alpha
Helix 4
AA4
L
78 82Right-handed 310
Helix 5
AA5
L
118 125Right-handed alpha
Helix 6
AA6
L
180 186Right-handed alpha
Helix 7
AA7
h
28 32Right-handed 310
Helix 8
AA8
h
87 91Right-handed 310
Helix 9
AA9
h
163 165Right-handed 310
Helix 10
AB1
h
194 199Right-handed alpha
Helix 11
AB2
h
208 211Right-handed 310
Helix 12
AB3
l
118 125Right-handed alpha
Helix 13
AB4
l
180 186Right-handed alpha
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There are 22 sheets in PDB entry 7S8G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
4 7first strand
Strand 2
H
18 24anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
115 119parallel
Strand 3
H
92 102anti-parallel
Strand 4
H
33 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
58 60anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
115 119parallel
Strand 3
H
92 102anti-parallel
Strand 4
H
105 111anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
127 131first strand
Strand 2
H
142 152anti-parallel
Strand 3
H
183 192anti-parallel
Strand 4
H
171 172anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
127 131first strand
Strand 2
H
142 152anti-parallel
Strand 3
H
183 192anti-parallel
Strand 4
H
176 177anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
158 161first strand
Strand 2
H
201 207anti-parallel
Strand 3
H
212 218anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
3 6first strand
Strand 2
L
18 24anti-parallel
Strand 3
L
69 74anti-parallel
Strand 4
L
61 66anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 12first strand
Strand 2
L
99 103parallel
Strand 3
L
84 89anti-parallel
Strand 4
L
32 37anti-parallel
Strand 5
L
44 48anti-parallel
Strand 6
L
52 53anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 12first strand
Strand 2
L
99 103parallel
Strand 3
L
84 89anti-parallel
Strand 4
L
94 95anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
112 115first strand
Strand 2
L
126 136anti-parallel
Strand 3
L
170 179anti-parallel
Strand 4
L
156 160anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
142 147first strand
Strand 2
L
188 194anti-parallel
Strand 3
L
202 207anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
h
4 7first strand
Strand 2
h
18 24anti-parallel
Strand 3
h
78 83anti-parallel
Strand 4
h
68 73anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
h
10 12first strand
Strand 2
h
115 119parallel
Strand 3
h
92 102anti-parallel
Strand 4
h
33 39anti-parallel
Strand 5
h
45 51anti-parallel
Strand 6
h
58 60anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
h
10 12first strand
Strand 2
h
115 119parallel
Strand 3
h
92 102anti-parallel
Strand 4
h
105 111anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
h
129 131first strand
Strand 2
h
142 148anti-parallel
Strand 3
h
186 192anti-parallel
Strand 4
h
171 172anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
h
158 161first strand
Strand 2
h
203 207anti-parallel
Strand 3
h
212 216anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
h
176 177first strand
Strand 2
h
183 184anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
l
3 6first strand
Strand 2
l
18 24anti-parallel
Strand 3
l
69 74anti-parallel
Strand 4
l
61 66anti-parallel
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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
l
9 12first strand
Strand 2
l
99 103parallel
Strand 3
l
84 89anti-parallel
Strand 4
l
32 37anti-parallel
Strand 5
l
44 48anti-parallel
Strand 6
l
52 53anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
l
9 12first strand
Strand 2
l
99 103parallel
Strand 3
l
84 89anti-parallel
Strand 4
l
94 95anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
l
113 115first strand
Strand 2
l
126 136anti-parallel
Strand 3
l
170 179anti-parallel
Strand 4
l
156 160anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
l
142 146first strand
Strand 2
l
189 194anti-parallel
Strand 3
l
202 206anti-parallel
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