Analysis of interatomic Contacts of Structural Units in PDB entry:
7S8U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S8U entry

There is 1 chain in PDB entry 7S8U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 11GLU 677
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7S8U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 45Right-handed alpha
Helix 2
AA2
A
49 78Right-handed alpha
Helix 3
AA3
A
80 104Right-handed alpha
Helix 4
AA4
A
120 153Right-handed alpha
Helix 5
AA5
A
158 187Right-handed alpha
Helix 6
AA6
A
198 217Right-handed alpha
Helix 7
AA7
A
232 249Right-handed alpha
Helix 8
AA8
A
258 269Right-handed alpha
Helix 9
AA9
A
272 289Right-handed alpha
Helix 10
AB1
A
291 311Right-handed alpha
Helix 11
AB2
A
325 344Right-handed alpha
Helix 12
AB3
A
357 384Right-handed alpha
Helix 13
AB4
A
580 582Right-handed 310
Helix 14
AB5
A
583 609Right-handed alpha
Helix 15
AB6
A
611 613Right-handed 310
Helix 16
AB7
A
614 638Right-handed alpha
Helix 17
AB8
A
644 669Right-handed alpha
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There are 4 sheets in PDB entry 7S8U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 432first strand
Strand 2
A
395 402anti-parallel
Strand 3
A
459 466parallel
Strand 4
A
469 474anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 419first strand
Strand 2
A
408 412anti-parallel
Strand 3
A
439 441anti-parallel
Strand 4
A
448 449anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
519 521first strand
Strand 2
A
486 492anti-parallel
Strand 3
A
553 558parallel
Strand 4
A
570 574anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
505 510first strand
Strand 2
A
498 502anti-parallel
Strand 3
A
527 531anti-parallel
Strand 4
A
542 544anti-parallel
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