Analysis of interatomic Contacts of Structural Units in PDB entry:
7S9C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S9C entry

There are 2 chains in PDB entry 7S9C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 13GLN 722
B
 THR 13GLN 722
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 7S9C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 32Right-handed alpha
Helix 2
AA2
A
53 65Right-handed alpha
Helix 3
AA3
A
66 70Right-handed 310
Helix 4
AA4
A
78 105Right-handed alpha
Helix 5
AA5
A
108 126Right-handed alpha
Helix 6
AA6
A
137 152Right-handed alpha
Helix 7
AA7
A
169 195Right-handed alpha
Helix 8
AA8
A
197 201Right-handed 310
Helix 9
AA9
A
206 231Right-handed alpha
Helix 10
AB1
A
241 253Right-handed alpha
Helix 11
AB2
A
258 282Right-handed alpha
Helix 12
AB3
A
291 308Right-handed alpha
Helix 13
AB4
A
335 361Right-handed alpha
Helix 14
AB5
A
371 388Right-handed alpha
Helix 15
AB6
A
397 407Right-handed alpha
Helix 16
AB7
A
411 427Right-handed alpha
Helix 17
AB8
A
436 453Right-handed alpha
Helix 18
AB9
A
457 465Right-handed alpha
Helix 19
AC1
A
466 481Right-handed alpha
Helix 20
AC2
A
484 505Right-handed alpha
Helix 21
AC3
A
549 561Right-handed alpha
Helix 22
AC4
A
563 579Right-handed alpha
Helix 23
AC5
A
653 671Right-handed alpha
Helix 24
AC6
A
681 689Right-handed alpha
Helix 25
AC7
A
696 700Right-handed 310
Helix 26
AC8
A
705 721Right-handed alpha
Helix 27
AC9
B
25 32Right-handed alpha
Helix 28
AD1
B
53 65Right-handed alpha
Helix 29
AD2
B
66 70Right-handed 310
Helix 30
AD3
B
78 105Right-handed alpha
Helix 31
AD4
B
108 126Right-handed alpha
Helix 32
AD5
B
137 152Right-handed alpha
Helix 33
AD6
B
169 195Right-handed alpha
Helix 34
AD7
B
197 201Right-handed 310
Helix 35
AD8
B
206 231Right-handed alpha
Helix 36
AD9
B
241 253Right-handed alpha
Helix 37
AE1
B
258 282Right-handed alpha
Helix 38
AE2
B
291 308Right-handed alpha
Helix 39
AE3
B
335 361Right-handed alpha
Helix 40
AE4
B
371 388Right-handed alpha
Helix 41
AE5
B
397 407Right-handed alpha
Helix 42
AE6
B
411 427Right-handed alpha
Helix 43
AE7
B
436 453Right-handed alpha
Helix 44
AE8
B
457 465Right-handed alpha
Helix 45
AE9
B
466 481Right-handed alpha
Helix 46
AF1
B
484 505Right-handed alpha
Helix 47
AF2
B
549 561Right-handed alpha
Helix 48
AF3
B
563 579Right-handed alpha
Helix 49
AF4
B
653 671Right-handed alpha
Helix 50
AF5
B
681 689Right-handed alpha
Helix 51
AF6
B
696 700Right-handed 310
Helix 52
AF7
B
705 721Right-handed alpha
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There are 4 sheets in PDB entry 7S9C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 513first strand
Strand 2
A
520 522anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 538first strand
Strand 2
A
641 645parallel
Strand 3
A
673 677parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
511 513first strand
Strand 2
B
520 522anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
535 538first strand
Strand 2
B
641 645parallel
Strand 3
B
673 677parallel
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