Analysis of interatomic Contacts of Structural Units in PDB entry:
7S9Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S9Z entry

There is 1 chain in PDB entry 7S9Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 942
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 7S9Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 8Right-handed alpha
Helix 2
AA2
A
11 37Right-handed alpha
Helix 3
AA3
A
39 45Right-handed alpha
Helix 4
AA4
A
48 69Right-handed alpha
Helix 5
AA5
A
76 100Right-handed alpha
Helix 6
AA6
A
306 325Right-handed alpha
Helix 7
AA7
A
330 342Right-handed alpha
Helix 8
AA8
A
389 396Right-handed alpha
Helix 9
AA9
A
400 405Right-handed alpha
Helix 10
AB1
A
419 431Right-handed alpha
Helix 11
AB2
A
440 451Right-handed alpha
Helix 12
AB3
A
451 456Right-handed alpha
Helix 13
AB4
A
465 473Right-handed alpha
Helix 14
AB5
A
482 487Right-handed 310
Helix 15
AB6
A
495 504Right-handed alpha
Helix 16
AB7
A
511 531Right-handed alpha
Helix 17
AB8
A
532 534Right-handed 310
Helix 18
AB9
A
552 558Right-handed alpha
Helix 19
AC1
A
558 563Right-handed alpha
Helix 20
AC2
A
566 589Right-handed alpha
Helix 21
AC3
A
592 609Right-handed alpha
Helix 22
AC4
A
615 629Right-handed alpha
Helix 23
AC5
A
634 655Right-handed alpha
Helix 24
AC6
A
660 689Right-handed alpha
Helix 25
AC7
A
696 716Right-handed alpha
Helix 26
AC8
A
719 740Right-handed alpha
Helix 27
AC9
A
755 789Right-handed alpha
Helix 28
AD1
A
794 833Right-handed alpha
Helix 29
AD2
A
842 859Right-handed alpha
Helix 30
AD3
A
860 862Right-handed 310
Helix 31
AD4
A
866 878Right-handed alpha
Helix 32
AD5
A
878 887Right-handed alpha
Helix 33
AD6
A
888 891Right-handed 310
Helix 34
AD7
A
909 926Right-handed alpha
Helix 35
AD8
A
927 929Right-handed 310
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There are 7 sheets in PDB entry 7S9Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 108first strand
Strand 2
A
296 303anti-parallel
Strand 3
A
284 290anti-parallel
Strand 4
A
277 279anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 117first strand
Strand 2
A
228 237anti-parallel
Strand 3
A
258 261anti-parallel
Strand 4
A
268 270anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 139first strand
Strand 2
A
122 126anti-parallel
Strand 3
A
221 225anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 168first strand
Strand 2
A
183 187anti-parallel
Strand 3
A
193 196anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 244first strand
Strand 2
A
251 255anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 410first strand
Strand 2
A
416 418anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 462first strand
Strand 2
A
480 481anti-parallel
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