Analysis of interatomic Contacts of Structural Units in PDB entry:
7SCE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SCE entry

There is 1 chain in PDB entry 7SCE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3PRO 1346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7SCE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 17Right-handed alpha
Helix 2
AA2
A
33 50Right-handed alpha
Helix 3
AA3
A
67 72Right-handed 310
Helix 4
AA4
A
96 106Right-handed alpha
Helix 5
AA5
A
1102 1111Right-handed alpha
Helix 6
AA6
A
1128 1133Right-handed alpha
Helix 7
AA7
A
1135 1142Right-handed alpha
Helix 8
AA8
A
1157 1161Right-handed 310
Helix 9
AA9
A
1164 1173Right-handed alpha
Helix 10
AB1
A
1184 1203Right-handed alpha
Helix 11
AB2
A
1209 1215Right-handed alpha
Helix 12
AB3
A
1226 1232Right-handed alpha
Helix 13
AB4
A
1233 1242Right-handed alpha
Helix 14
AB5
A
1246 1248Right-handed 310
Helix 15
AB6
A
1255 1261Right-handed alpha
Helix 16
AB7
A
1261 1273Right-handed alpha
Helix 17
AB8
A
1280 1282Right-handed 310
Helix 18
AB9
A
1317 1340Right-handed alpha
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There are 4 sheets in PDB entry 7SCE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
55 60parallel
Strand 3
A
23 29parallel
Strand 4
A
78 83anti-parallel
Strand 5
A
87 92anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1087 1088first strand
Strand 2
A
1145 1146anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1116 1118first strand
Strand 2
A
1151 1155parallel
Strand 3
A
1093 1097parallel
Strand 4
A
1177 1182parallel
Strand 5
A
1250 1254parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1284 1287first strand
Strand 2
A
1292 1296anti-parallel
Strand 3
A
1302 1303anti-parallel
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