Analysis of interatomic Contacts of Structural Units in PDB entry:
7SDE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SDE entry

There are 2 chains in PDB entry 7SDE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 17GLY 547
B
 ASP 195ILE 463
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 7SDE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 41Right-handed alpha
Helix 2
AA2
A
43 53Right-handed alpha
Helix 3
AA3
A
65 76Right-handed alpha
Helix 4
AA4
A
83 91Right-handed alpha
Helix 5
AA5
A
99 116Right-handed alpha
Helix 6
AA6
A
126 140Right-handed alpha
Helix 7
AA7
A
204 209Right-handed alpha
Helix 8
AA8
A
215 220Right-handed alpha
Helix 9
AA9
A
229 239Right-handed alpha
Helix 10
AB1
A
239 261Right-handed alpha
Helix 11
AB2
A
268 276Right-handed alpha
Helix 12
AB3
A
279 286Right-handed alpha
Helix 13
AB4
A
287 289Right-handed 310
Helix 14
AB5
A
292 302Right-handed alpha
Helix 15
AB6
A
339 363Right-handed alpha
Helix 16
AB7
A
380 391Right-handed alpha
Helix 17
AB8
A
394 403Right-handed alpha
Helix 18
AB9
A
413 426Right-handed alpha
Helix 19
AC1
A
437 442Right-handed 310
Helix 20
AC2
A
444 450Right-handed alpha
Helix 21
AC3
A
451 457Right-handed alpha
Helix 22
AC4
A
471 496Right-handed alpha
Helix 23
AC5
A
506 518Right-handed alpha
Helix 24
AC6
A
518 529Right-handed alpha
Helix 25
AC7
A
539 547Right-handed alpha
Helix 26
AC8
B
208 217Right-handed alpha
Helix 27
AC9
B
219 225Right-handed alpha
Helix 28
AD1
B
245 253Right-handed alpha
Helix 29
AD2
B
283 292Right-handed alpha
Helix 30
AD3
B
300 317Right-handed alpha
Helix 31
AD4
B
317 322Right-handed alpha
Helix 32
AD5
B
329 336Right-handed alpha
Helix 33
AD6
B
339 346Right-handed alpha
Helix 34
AD7
B
354 366Right-handed alpha
Helix 35
AD8
B
370 378Right-handed alpha
Helix 36
AD9
B
388 397Right-handed alpha
Helix 37
AE1
B
404 416Right-handed alpha
Helix 38
AE2
B
432 441Right-handed alpha
Helix 39
AE3
B
449 462Right-handed alpha
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There are no sheets in PDB entry 7SDE
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