Analysis of interatomic Contacts of Structural Units in PDB entry:
7SEY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SEY entry

There is 1 chain in PDB entry 7SEY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1LYS 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7SEY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 26Right-handed alpha
Helix 2
AA2
A
34 39Right-handed 310
Helix 3
AA3
A
40 52Right-handed alpha
Helix 4
AA4
A
57 78Right-handed alpha
Helix 5
AA5
A
90 104Right-handed alpha
Helix 6
AA6
A
115 130Right-handed alpha
Helix 7
AA7
A
141 146Right-handed alpha
Helix 8
AA8
A
147 149Right-handed 310
Helix 9
AA9
A
162 167Right-handed 310
Helix 10
AB1
A
168 183Right-handed alpha
Helix 11
AB2
A
198 205Right-handed alpha
Helix 12
AB3
A
211 218Right-handed alpha
Helix 13
AB4
A
218 229Right-handed alpha
Helix 14
AB5
A
233 235Right-handed 310
Helix 15
AB6
A
265 268Right-handed 310
Helix 16
AB7
A
288 300Right-handed alpha
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There are 3 sheets in PDB entry 7SEY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
134 139parallel
Strand 3
A
108 112parallel
Strand 4
A
81 85parallel
Strand 5
A
155 159parallel
Strand 6
A
188 194parallel
Strand 7
A
314 320anti-parallel
Strand 8
A
302 308anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 244first strand
Strand 2
A
249 256anti-parallel
Strand 3
A
278 285anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 264first strand
Strand 2
A
269 273anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il