Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 7SFT entry
There are 2 chains in PDB entry 7SFT
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
|---|
A
|
GLY 2236 | GLY 2330 |
B
|
TRP 988 | GLU 1008 |
Back to top of page
There are no helices in PDB entry
7SFT
There are
3 sheets in PDB entry 7SFT. Click on sheet of
interest to get list of strands forming it:
AA1,
AA2,
AA3,
There are 4
strands in AA1 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 2242 |
2244 | first strand |
| Strand 2 |
A
| 2256 |
2262 | anti-parallel |
| Strand 3 |
A
| 2294 |
2298 | anti-parallel |
| Strand 4 |
A
| 2284 |
2286 | anti-parallel |
Back to list of sheets
Back to top of page
There are 2
strands in AA2 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 2251 |
2252 | first strand |
| Strand 2 |
A
| 2325 |
2326 | parallel |
Back to list of sheets
Back to top of page
There are 3
strands in AA3 sheet. Click on strand of interest
for CSU analysis.
Strand
number
| Chain
ID |
Initial
residue | Terminal
residue |
Strand sense |
|---|
| Strand 1 |
A
| 2306 |
2311 | first strand |
| Strand 2 |
A
| 2271 |
2276 | anti-parallel |
| Strand 3 |
B
| 989 |
993 | anti-parallel |
Back to list of sheets
Back to top of page
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il