Analysis of interatomic Contacts of Structural Units in PDB entry:
7SFZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SFZ entry

There are 8 chains in PDB entry 7SFZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
GLU 78SER 180
A
GLU 78SER 180
C
ARG 79SER 180
D
GLU 78GLY 179
E
PRO 80GLY 179
F
ARG 79GLY 179
G
GLU 77SER 180
H
ARG 79GLY 179
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 7SFZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
B
96 98Right-handed 310
Helix 2
AA2
B
156 160Right-handed 310
Helix 3
AA3
A
156 160Right-handed 310
Helix 4
AA4
C
156 163Right-handed 310
Helix 5
AA5
E
159 163Right-handed 310
Helix 6
AA6
F
156 163Right-handed 310
Helix 7
AA7
G
156 160Right-handed 310
Helix 8
AA8
H
156 160Right-handed 310
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There are 18 sheets in PDB entry 7SFZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
91 94first strand
Strand 2
B
81 85anti-parallel
Strand 3
B
173 177anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
107 110first strand
Strand 2
B
166 169anti-parallel
Strand 3
B
147 154anti-parallel
Strand 4
B
135 141anti-parallel
Strand 5
B
117 120anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
91 94first strand
Strand 2
A
81 85anti-parallel
Strand 3
A
173 177anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
98 102first strand
Strand 2
A
107 110anti-parallel
Strand 3
A
166 169anti-parallel
Strand 4
A
147 154anti-parallel
Strand 5
A
135 141anti-parallel
Strand 6
A
117 119anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
98 102first strand
Strand 2
A
107 110anti-parallel
Strand 3
A
166 169anti-parallel
Strand 4
A
147 154anti-parallel
Strand 5
A
135 141anti-parallel
Strand 6
A
124 125anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
91 94first strand
Strand 2
C
81 85anti-parallel
Strand 3
C
173 177anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
98 99first strand
Strand 2
C
107 110anti-parallel
Strand 3
C
166 169anti-parallel
Strand 4
C
147 154anti-parallel
Strand 5
C
135 141anti-parallel
Strand 6
C
117 125anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
91 94first strand
Strand 2
D
81 85anti-parallel
Strand 3
D
173 177anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
98 99first strand
Strand 2
D
107 110anti-parallel
Strand 3
D
166 169anti-parallel
Strand 4
D
147 154anti-parallel
Strand 5
D
135 141anti-parallel
Strand 6
D
117 124anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
91 94first strand
Strand 2
E
81 85anti-parallel
Strand 3
E
173 177anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
98 99first strand
Strand 2
E
107 110anti-parallel
Strand 3
E
166 169anti-parallel
Strand 4
E
147 154anti-parallel
Strand 5
E
135 141anti-parallel
Strand 6
E
117 119anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
98 99first strand
Strand 2
E
107 110anti-parallel
Strand 3
E
166 169anti-parallel
Strand 4
E
147 154anti-parallel
Strand 5
E
135 141anti-parallel
Strand 6
E
124 125anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
91 94first strand
Strand 2
F
81 85anti-parallel
Strand 3
F
173 177anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
98 99first strand
Strand 2
F
107 110anti-parallel
Strand 3
F
166 169anti-parallel
Strand 4
F
147 154anti-parallel
Strand 5
F
135 141anti-parallel
Strand 6
F
117 125anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
91 94first strand
Strand 2
G
81 85anti-parallel
Strand 3
G
173 177anti-parallel
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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
98 99first strand
Strand 2
G
107 110anti-parallel
Strand 3
G
166 169anti-parallel
Strand 4
G
147 154anti-parallel
Strand 5
G
135 141anti-parallel
Strand 6
G
117 119anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
91 94first strand
Strand 2
H
81 85anti-parallel
Strand 3
H
173 177anti-parallel
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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
98 99first strand
Strand 2
H
107 110anti-parallel
Strand 3
H
166 169anti-parallel
Strand 4
H
149 154anti-parallel
Strand 5
H
135 141anti-parallel
Strand 6
H
117 119anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il