Analysis of interatomic Contacts of Structural Units in PDB entry:
7SGE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SGE entry

There are 2 chains in PDB entry 7SGE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1CYS 206
B
 THR 1ILE 145
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7SGE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 14Right-handed alpha
Helix 2
AA2
A
23 37Right-handed alpha
Helix 3
AA3
A
50 58Right-handed alpha
Helix 4
AA4
A
59 65Right-handed 310
Helix 5
AA5
A
75 85Right-handed alpha
Helix 6
AA6
A
96 106Right-handed alpha
Helix 7
AA7
A
116 126Right-handed alpha
Helix 8
AA8
A
140 147Right-handed alpha
Helix 9
AA9
A
170 174Right-handed 310
Helix 10
AB1
A
188 205Right-handed alpha
Helix 11
AB2
B
12 32Right-handed alpha
Helix 12
AB3
B
44 46Right-handed 310
Helix 13
AB4
B
47 57Right-handed alpha
Helix 14
AB5
B
78 97Right-handed alpha
Helix 15
AB6
B
113 145Right-handed alpha
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There are 4 sheets in PDB entry 7SGE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 71first strand
Strand 2
A
41 45parallel
Strand 3
A
15 19parallel
Strand 4
A
178 180parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 91first strand
Strand 2
A
109 111parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 133first strand
Strand 2
A
155 158parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 41first strand
Strand 2
B
2 8parallel
Strand 3
B
61 69parallel
Strand 4
B
101 105parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il