Analysis of interatomic Contacts of Structural Units in PDB entry:
7SGF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7SGF entry

There are 12 chains in PDB entry 7SGF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 60	GLN 247
a	GLY 276	LEU 415
H	GLN 3	VAL 124
L	VAL 3	VAL 109
B	SER 60	GLN 247
b	GLY 276	LEU 415
J	GLN 3	VAL 124
K	VAL 3	VAL 109
C	SER 60	GLN 247
c	GLY 276	LEU 415
M	GLN 3	VAL 124
N	VAL 3	VAL 109

There are 36 helices in PDB entry 7SGF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	74	79	Right-handed 310
Helix 2	AA2	A	130	143	Right-handed alpha
Helix 3	AA3	A	182	194	Right-handed alpha
Helix 4	AA4	A	238	245	Right-handed alpha
Helix 5	AA5	a	294	304	Right-handed alpha
Helix 6	AA6	a	307	327	Right-handed alpha
Helix 7	AA7	a	333	345	Right-handed alpha
Helix 8	AA8	a	346	359	Right-handed alpha
Helix 9	AA9	a	399	415	Right-handed alpha
Helix 10	AB1	H	64	67	Right-handed 310
Helix 11	AB2	H	87	91	Right-handed 310
Helix 12	AB3	L	81	85	Right-handed 310
Helix 13	AB4	B	74	79	Right-handed 310
Helix 14	AB5	B	130	143	Right-handed alpha
Helix 15	AB6	B	182	194	Right-handed alpha
Helix 16	AB7	B	238	245	Right-handed alpha
Helix 17	AB8	b	294	304	Right-handed alpha
Helix 18	AB9	b	307	327	Right-handed alpha
Helix 19	AC1	b	333	345	Right-handed alpha
Helix 20	AC2	b	346	359	Right-handed alpha
Helix 21	AC3	b	399	415	Right-handed alpha
Helix 22	AC4	J	64	67	Right-handed 310
Helix 23	AC5	J	87	91	Right-handed 310
Helix 24	AC6	K	81	85	Right-handed 310
Helix 25	AC7	C	74	79	Right-handed 310
Helix 26	AC8	C	130	143	Right-handed alpha
Helix 27	AC9	C	182	194	Right-handed alpha
Helix 28	AD1	C	238	245	Right-handed alpha
Helix 29	AD2	c	294	304	Right-handed alpha
Helix 30	AD3	c	307	327	Right-handed alpha
Helix 31	AD4	c	333	345	Right-handed alpha
Helix 32	AD5	c	346	359	Right-handed alpha
Helix 33	AD6	c	399	415	Right-handed alpha
Helix 34	AD7	M	64	67	Right-handed 310
Helix 35	AD8	M	87	91	Right-handed 310
Helix 36	AD9	N	81	85	Right-handed 310

There are 27 sheets in PDB entry 7SGF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	62	first strand
Strand 2	A	66	72	anti-parallel
Strand 3	a	363	374	anti-parallel
Strand 4	a	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	62	first strand
Strand 2	A	66	72	anti-parallel
Strand 3	a	363	374	anti-parallel
Strand 4	a	384	389	anti-parallel
Strand 5	a	392	393	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	87	first strand
Strand 2	A	92	96	anti-parallel
Strand 3	A	102	108	anti-parallel
Strand 4	A	219	225	anti-parallel
Strand 5	A	163	167	anti-parallel
Strand 6	A	154	155	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	7	first strand
Strand 2	H	16	24	anti-parallel
Strand 3	H	78	86	anti-parallel
Strand 4	H	69	74	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	11	first strand
Strand 2	H	120	123	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	35	40	anti-parallel
Strand 5	H	47	52	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	11	first strand
Strand 2	H	120	123	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	113	116	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	102	103	first strand
Strand 2	H	109	110	anti-parallel
Strand 3	L	93	94	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	6	first strand
Strand 2	L	20	25	anti-parallel
Strand 3	L	72	77	anti-parallel
Strand 4	L	64	69	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	12	first strand
Strand 2	L	106	109	parallel
Strand 3	L	86	91	anti-parallel
Strand 4	L	36	40	anti-parallel
Strand 5	L	47	51	anti-parallel
Strand 6	L	55	56	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	62	first strand
Strand 2	B	66	72	anti-parallel
Strand 3	b	363	374	anti-parallel
Strand 4	b	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	62	first strand
Strand 2	B	66	72	anti-parallel
Strand 3	b	363	374	anti-parallel
Strand 4	b	384	389	anti-parallel
Strand 5	b	392	393	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	87	first strand
Strand 2	B	92	96	anti-parallel
Strand 3	B	102	108	anti-parallel
Strand 4	B	219	225	anti-parallel
Strand 5	B	163	167	anti-parallel
Strand 6	B	154	155	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	4	7	first strand
Strand 2	J	16	24	anti-parallel
Strand 3	J	78	86	anti-parallel
Strand 4	J	69	74	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	11	first strand
Strand 2	J	120	123	parallel
Strand 3	J	92	99	anti-parallel
Strand 4	J	35	40	anti-parallel
Strand 5	J	47	52	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	11	first strand
Strand 2	J	120	123	parallel
Strand 3	J	92	99	anti-parallel
Strand 4	J	113	116	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	102	103	first strand
Strand 2	J	109	110	anti-parallel
Strand 3	K	93	94	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	4	6	first strand
Strand 2	K	20	25	anti-parallel
Strand 3	K	72	77	anti-parallel
Strand 4	K	64	69	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	12	first strand
Strand 2	K	106	109	parallel
Strand 3	K	86	91	anti-parallel
Strand 4	K	36	40	anti-parallel
Strand 5	K	47	51	anti-parallel
Strand 6	K	55	56	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	62	first strand
Strand 2	C	66	72	anti-parallel
Strand 3	c	363	374	anti-parallel
Strand 4	c	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	62	first strand
Strand 2	C	66	72	anti-parallel
Strand 3	c	363	374	anti-parallel
Strand 4	c	384	389	anti-parallel
Strand 5	c	392	393	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	87	first strand
Strand 2	C	92	96	anti-parallel
Strand 3	C	102	108	anti-parallel
Strand 4	C	219	225	anti-parallel
Strand 5	C	163	167	anti-parallel
Strand 6	C	154	155	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	4	7	first strand
Strand 2	M	16	24	anti-parallel
Strand 3	M	78	86	anti-parallel
Strand 4	M	69	74	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	10	11	first strand
Strand 2	M	120	123	parallel
Strand 3	M	92	99	anti-parallel
Strand 4	M	35	40	anti-parallel
Strand 5	M	47	52	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	10	11	first strand
Strand 2	M	120	123	parallel
Strand 3	M	92	99	anti-parallel
Strand 4	M	113	116	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	102	103	first strand
Strand 2	M	109	110	anti-parallel
Strand 3	N	93	94	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	4	6	first strand
Strand 2	N	20	25	anti-parallel
Strand 3	N	72	77	anti-parallel
Strand 4	N	64	69	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	10	12	first strand
Strand 2	N	106	109	parallel
Strand 3	N	86	91	anti-parallel
Strand 4	N	36	40	anti-parallel
Strand 5	N	47	51	anti-parallel
Strand 6	N	55	56	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7SGF

Analysis of interatomic Contacts of Structural Units in PDB entry:
7SGF