Analysis of interatomic Contacts of Structural Units in PDB entry:
7SHF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7SHF entry

There are 4 chains in PDB entry 7SHF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	SER 18	ALA 450
D	GLU 8	ALA 353
B	SER 406	ARG 730
A	SER 406	PRO 738

There are 64 helices in PDB entry 7SHF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	20	35	Right-handed alpha
Helix 2	AA2	C	59	70	Right-handed alpha
Helix 3	AA3	C	74	88	Right-handed alpha
Helix 4	AA4	C	116	120	Right-handed 310
Helix 5	AA5	C	124	138	Right-handed alpha
Helix 6	AA6	C	146	160	Right-handed alpha
Helix 7	AA7	C	163	180	Right-handed alpha
Helix 8	AA8	C	183	192	Right-handed alpha
Helix 9	AA9	C	196	201	Right-handed alpha
Helix 10	AB1	C	254	271	Right-handed alpha
Helix 11	AB2	C	275	290	Right-handed alpha
Helix 12	AB3	C	291	294	Right-handed 310
Helix 13	AB4	C	304	309	Right-handed alpha
Helix 14	AB5	C	311	319	Right-handed alpha
Helix 15	AB6	C	323	331	Right-handed alpha
Helix 16	AB7	C	333	340	Right-handed alpha
Helix 17	AB8	C	340	355	Right-handed alpha
Helix 18	AB9	C	357	371	Right-handed alpha
Helix 19	AC1	C	373	375	Right-handed 310
Helix 20	AC2	C	376	389	Right-handed alpha
Helix 21	AC3	C	400	411	Right-handed alpha
Helix 22	AC4	C	419	433	Right-handed alpha
Helix 23	AC5	C	433	441	Right-handed alpha
Helix 24	AC6	C	441	449	Right-handed alpha
Helix 25	AC7	D	9	34	Right-handed alpha
Helix 26	AC8	D	37	43	Right-handed alpha
Helix 27	AC9	D	141	146	Right-handed alpha
Helix 28	AD1	B	416	442	Right-handed alpha
Helix 29	AD2	B	444	451	Right-handed alpha
Helix 30	AD3	B	451	457	Right-handed alpha
Helix 31	AD4	B	457	465	Right-handed alpha
Helix 32	AD5	B	466	471	Right-handed alpha
Helix 33	AD6	B	488	496	Right-handed alpha
Helix 34	AD7	B	498	503	Right-handed alpha
Helix 35	AD8	B	504	509	Right-handed alpha
Helix 36	AD9	B	510	515	Right-handed alpha
Helix 37	AE1	B	532	546	Right-handed alpha
Helix 38	AE2	B	546	551	Right-handed alpha
Helix 39	AE3	B	577	586	Right-handed alpha
Helix 40	AE4	B	589	599	Right-handed alpha
Helix 41	AE5	B	608	613	Right-handed alpha
Helix 42	AE6	B	615	620	Right-handed alpha
Helix 43	AE7	B	622	634	Right-handed alpha
Helix 44	AE8	B	641	652	Right-handed alpha
Helix 45	AE9	B	654	662	Right-handed alpha
Helix 46	AF1	B	713	730	Right-handed alpha
Helix 47	AF2	A	414	422	Right-handed alpha
Helix 48	AF3	A	423	428	Right-handed alpha
Helix 49	AF4	A	436	442	Right-handed alpha
Helix 50	AF5	A	451	456	Right-handed alpha
Helix 51	AF6	A	461	465	Right-handed 310
Helix 52	AF7	A	466	475	Right-handed alpha
Helix 53	AF8	A	482	487	Right-handed alpha
Helix 54	AF9	A	504	509	Right-handed alpha
Helix 55	AG1	A	529	548	Right-handed alpha
Helix 56	AG2	A	550	555	Right-handed alpha
Helix 57	AG3	A	584	589	Right-handed alpha
Helix 58	AG4	A	589	596	Right-handed alpha
Helix 59	AG5	A	608	613	Right-handed alpha
Helix 60	AG6	A	614	634	Right-handed alpha
Helix 61	AG7	A	642	649	Right-handed alpha
Helix 62	AG8	A	657	662	Right-handed alpha
Helix 63	AG9	A	663	667	Right-handed 310
Helix 64	AH1	A	709	731	Right-handed alpha

There are 10 sheets in PDB entry 7SHF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	47	first strand
Strand 2	C	52	58	anti-parallel
Strand 3	C	107	110	anti-parallel
Strand 4	C	91	93	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	59	first strand
Strand 2	D	349	353	anti-parallel
Strand 3	D	340	343	anti-parallel
Strand 4	D	332	333	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	71	first strand
Strand 2	D	77	82	anti-parallel
Strand 3	D	86	91	anti-parallel
Strand 4	D	96	102	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	113	first strand
Strand 2	D	119	123	anti-parallel
Strand 3	D	128	133	anti-parallel
Strand 4	D	147	151	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	156	161	first strand
Strand 2	D	167	172	anti-parallel
Strand 3	D	177	181	anti-parallel
Strand 4	D	187	191	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	203	first strand
Strand 2	D	211	216	anti-parallel
Strand 3	D	221	225	anti-parallel
Strand 4	D	233	235	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	242	247	first strand
Strand 2	D	253	258	anti-parallel
Strand 3	D	263	267	anti-parallel
Strand 4	D	275	277	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	286	291	first strand
Strand 2	D	297	302	anti-parallel
Strand 3	D	307	311	anti-parallel
Strand 4	D	317	321	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	562	563	first strand
Strand 2	B	569	570	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	559	563	first strand
Strand 2	A	569	573	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7SHF

Analysis of interatomic Contacts of Structural Units in PDB entry:
7SHF