Analysis of interatomic Contacts of Structural Units in PDB entry:
7SHI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SHI entry

There are 2 chains in PDB entry 7SHI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 6TRP 396
B
 PRO 6TRP 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 7SHI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 31Right-handed alpha
Helix 2
AA2
A
49 57Right-handed alpha
Helix 3
AA3
A
68 72Right-handed 310
Helix 4
AA4
A
78 85Right-handed alpha
Helix 5
AA5
A
88 104Right-handed alpha
Helix 6
AA6
A
105 107Right-handed 310
Helix 7
AA7
A
108 114Right-handed alpha
Helix 8
AA8
A
115 131Right-handed alpha
Helix 9
AA9
A
139 143Right-handed alpha
Helix 10
AB1
A
143 157Right-handed alpha
Helix 11
AB2
A
159 163Right-handed 310
Helix 12
AB3
A
165 174Right-handed alpha
Helix 13
AB4
A
178 203Right-handed alpha
Helix 14
AB5
A
207 216Right-handed alpha
Helix 15
AB6
A
218 251Right-handed alpha
Helix 16
AB7
A
251 261Right-handed alpha
Helix 17
AB8
A
261 276Right-handed alpha
Helix 18
AB9
A
309 314Right-handed alpha
Helix 19
AC1
A
340 344Right-handed 310
Helix 20
AC2
A
347 366Right-handed alpha
Helix 21
AC3
B
21 31Right-handed alpha
Helix 22
AC4
B
49 57Right-handed alpha
Helix 23
AC5
B
78 83Right-handed alpha
Helix 24
AC6
B
88 104Right-handed alpha
Helix 25
AC7
B
105 107Right-handed 310
Helix 26
AC8
B
108 131Right-handed alpha
Helix 27
AC9
B
139 143Right-handed alpha
Helix 28
AD1
B
143 157Right-handed alpha
Helix 29
AD2
B
159 163Right-handed 310
Helix 30
AD3
B
165 174Right-handed alpha
Helix 31
AD4
B
178 203Right-handed alpha
Helix 32
AD5
B
207 216Right-handed alpha
Helix 33
AD6
B
218 251Right-handed alpha
Helix 34
AD7
B
251 261Right-handed alpha
Helix 35
AD8
B
261 276Right-handed alpha
Helix 36
AD9
B
309 314Right-handed alpha
Helix 37
AE1
B
340 344Right-handed 310
Helix 38
AE2
B
347 366Right-handed alpha
Helix 39
AE3
B
374 378Right-handed 310
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There are 6 sheets in PDB entry 7SHI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
43 47anti-parallel
Strand 3
A
305 308parallel
Strand 4
A
287 289anti-parallel
Strand 5
A
62 63anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
393 395anti-parallel
Strand 3
A
370 371anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 295first strand
Strand 2
A
298 300anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 37first strand
Strand 2
B
43 47anti-parallel
Strand 3
B
305 308parallel
Strand 4
B
287 289anti-parallel
Strand 5
B
62 63anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 138first strand
Strand 2
B
393 395anti-parallel
Strand 3
B
370 371anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 295first strand
Strand 2
B
298 300anti-parallel
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