Analysis of interatomic Contacts of Structural Units in PDB entry:
7SHJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SHJ entry

There are 2 chains in PDB entry 7SHJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 8ASN 264
B
 GLN 8LEU 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7SHJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 25Right-handed alpha
Helix 2
AA2
A
47 56Right-handed alpha
Helix 3
AA3
A
70 76Right-handed alpha
Helix 4
AA4
A
84 86Right-handed 310
Helix 5
AA5
A
109 112Right-handed 310
Helix 6
AA6
A
113 132Right-handed alpha
Helix 7
AA7
A
135 156Right-handed alpha
Helix 8
AA8
A
173 175Right-handed 310
Helix 9
AA9
A
176 181Right-handed alpha
Helix 10
AB1
A
197 207Right-handed alpha
Helix 11
AB2
A
246 264Right-handed alpha
Helix 12
AB3
B
14 26Right-handed alpha
Helix 13
AB4
B
47 55Right-handed alpha
Helix 14
AB5
B
67 75Right-handed alpha
Helix 15
AB6
B
84 86Right-handed 310
Helix 16
AB7
B
109 112Right-handed 310
Helix 17
AB8
B
113 132Right-handed alpha
Helix 18
AB9
B
135 157Right-handed alpha
Helix 19
AC1
B
173 175Right-handed 310
Helix 20
AC2
B
176 181Right-handed alpha
Helix 21
AC3
B
197 208Right-handed alpha
Helix 22
AC4
B
246 263Right-handed alpha
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There are 4 sheets in PDB entry 7SHJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 33first strand
Strand 2
A
10 12parallel
Strand 3
A
58 61parallel
Strand 4
A
80 82parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 187first strand
Strand 2
A
164 168parallel
Strand 3
A
213 217parallel
Strand 4
A
232 236parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
9 12parallel
Strand 3
B
56 61parallel
Strand 4
B
80 82parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 189first strand
Strand 2
B
165 170parallel
Strand 3
B
213 218parallel
Strand 4
B
232 237parallel
Strand 5
B
227 229anti-parallel
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