Analysis of interatomic Contacts of Structural Units in PDB entry:
7SID


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SID entry

There are 4 chains in PDB entry 7SID (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 5VAL 3056
B
 ALA 740TYR 749
C
 LEU 5VAL 3056
D
 ALA 740TYR 749
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are324 helices in PDB entry 7SID. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 16Right-handed alpha
Helix 2
AA2
A
21 33Right-handed alpha
Helix 3
AA3
A
35 43Right-handed alpha
Helix 4
AA4
A
57 74Right-handed alpha
Helix 5
AA5
A
88 109Right-handed alpha
Helix 6
AA6
A
116 130Right-handed alpha
Helix 7
AA7
A
134 149Right-handed alpha
Helix 8
AA8
A
152 159Right-handed alpha
Helix 9
AA9
A
160 174Right-handed alpha
Helix 10
AB1
A
182 201Right-handed alpha
Helix 11
AB2
A
206 208Right-handed 310
Helix 12
AB3
A
209 223Right-handed alpha
Helix 13
AB4
A
228 244Right-handed alpha
Helix 14
AB5
A
247 269Right-handed alpha
Helix 15
AB6
A
272 291Right-handed alpha
Helix 16
AB7
A
297 301Right-handed 310
Helix 17
AB8
A
305 324Right-handed alpha
Helix 18
AB9
A
342 357Right-handed alpha
Helix 19
AC1
A
392 403Right-handed alpha
Helix 20
AC2
A
405 408Right-handed 310
Helix 21
AC3
A
409 423Right-handed alpha
Helix 22
AC4
A
424 427Right-handed 310
Helix 23
AC5
A
428 430Right-handed 310
Helix 24
AC6
A
431 443Right-handed alpha
Helix 25
AC7
A
451 468Right-handed alpha
Helix 26
AC8
A
473 493Right-handed alpha
Helix 27
AC9
A
497 499Right-handed 310
Helix 28
AD1
A
500 514Right-handed alpha
Helix 29
AD2
A
520 528Right-handed alpha
Helix 30
AD3
A
535 548Right-handed alpha
Helix 31
AD4
A
572 581Right-handed alpha
Helix 32
AD5
A
596 601Right-handed alpha
Helix 33
AD6
A
607 617Right-handed alpha
Helix 34
AD7
A
619 629Right-handed alpha
Helix 35
AD8
A
645 656Right-handed alpha
Helix 36
AD9
A
683 704Right-handed alpha
Helix 37
AE1
A
711 732Right-handed alpha
Helix 38
AE2
A
736 742Right-handed alpha
Helix 39
AE3
A
743 766Right-handed alpha
Helix 40
AE4
A
772 787Right-handed alpha
Helix 41
AE5
A
794 807Right-handed alpha
Helix 42
AE6
A
808 825Right-handed alpha
Helix 43
AE7
A
886 890Right-handed 310
Helix 44
AE8
A
891 912Right-handed alpha
Helix 45
AE9
A
919 930Right-handed alpha
Helix 46
AF1
A
940 954Right-handed alpha
Helix 47
AF2
A
962 971Right-handed alpha
Helix 48
AF3
A
972 980Right-handed alpha
Helix 49
AF4
A
983 995Right-handed alpha
Helix 50
AF5
A
997 1002Right-handed alpha
Helix 51
AF6
A
1008 1031Right-handed alpha
Helix 52
AF7
A
1035 1053Right-handed alpha
Helix 53
AF8
A
1070 1075Right-handed alpha
Helix 54
AF9
A
1076 1080Right-handed 310
Helix 55
AG1
A
1082 1093Right-handed alpha
Helix 56
AG2
A
1094 1097Right-handed 310
Helix 57
AG3
A
1112 1133Right-handed alpha
Helix 58
AG4
A
1143 1165Right-handed alpha
Helix 59
AG5
A
1168 1183Right-handed alpha
Helix 60
AG6
A
1186 1202Right-handed alpha
Helix 61
AG7
A
1205 1225Right-handed alpha
Helix 62
AG8
A
1236 1240Right-handed 310
Helix 63
AG9
A
1243 1262Right-handed alpha
Helix 64
AH1
A
1264 1274Right-handed alpha
Helix 65
AH2
A
1278 1286Right-handed alpha
Helix 66
AH3
A
1286 1292Right-handed alpha
Helix 67
AH4
A
1294 1299Right-handed alpha
Helix 68
AH5
A
1305 1323Right-handed alpha
Helix 69
AH6
A
1327 1330Right-handed 310
Helix 70
AH7
A
1331 1339Right-handed alpha
Helix 71
AH8
A
1340 1349Right-handed alpha
Helix 72
AH9
A
1382 1397Right-handed alpha
Helix 73
AI1
A
1403 1409Right-handed alpha
Helix 74
AI2
A
1413 1429Right-handed alpha
Helix 75
AI3
A
1431 1452Right-handed alpha
Helix 76
AI4
A
1453 1456Right-handed 310
Helix 77
AI5
A
1460 1478Right-handed alpha
Helix 78
AI6
A
1484 1509Right-handed alpha
Helix 79
AI7
A
1516 1525Right-handed alpha
Helix 80
AI8
A
1526 1528Right-handed 310
Helix 81
AI9
A
1534 1547Right-handed alpha
Helix 82
AJ1
A
1552 1561Right-handed alpha
Helix 83
AJ2
A
1568 1570Right-handed 310
Helix 84
AJ3
A
1571 1583Right-handed alpha
Helix 85
AJ4
A
1589 1602Right-handed alpha
Helix 86
AJ5
A
1606 1609Right-handed 310
Helix 87
AJ6
A
1610 1623Right-handed alpha
Helix 88
AJ7
A
1624 1635Right-handed alpha
Helix 89
AJ8
A
1636 1637Right-handed 310
Helix 90
AJ9
A
1638 1641Right-handed 310
Helix 91
AK1
A
1642 1658Right-handed alpha
Helix 92
AK2
A
1663 1678Right-handed alpha
Helix 93
AK3
A
1693 1703Right-handed alpha
Helix 94
AK4
A
1705 1722Right-handed alpha
Helix 95
AK5
A
1726 1742Right-handed alpha
Helix 96
AK6
A
1743 1754Right-handed alpha
Helix 97
AK7
A
1758 1765Right-handed alpha
Helix 98
AK8
A
1785 1790Right-handed alpha
Helix 99
AK9
A
1791 1796Right-handed alpha
Helix 100
AL1
A
1801 1816Right-handed alpha
Helix 101
AL2
A
1823 1826Right-handed 310
Helix 102
AL3
A
1827 1832Right-handed alpha
Helix 103
AL4
A
1834 1852Right-handed alpha
Helix 104
AL5
A
1857 1876Right-handed alpha
Helix 105
AL6
A
1902 1918Right-handed alpha
Helix 106
AL7
A
1928 1932Right-handed 310
Helix 107
AL8
A
1937 1948Right-handed alpha
Helix 108
AL9
A
1950 1974Right-handed alpha
Helix 109
AM1
A
1985 1997Right-handed alpha
Helix 110
AM2
A
2000 2013Right-handed alpha
Helix 111
AM3
A
2015 2020Right-handed 310
Helix 112
AM4
A
2028 2039Right-handed alpha
Helix 113
AM5
A
2041 2052Right-handed alpha
Helix 114
AM6
A
2056 2071Right-handed alpha
Helix 115
AM7
A
2073 2088Right-handed alpha
Helix 116
AM8
A
2092 2107Right-handed alpha
Helix 117
AM9
A
2123 2137Right-handed alpha
Helix 118
AN1
A
2139 2161Right-handed alpha
Helix 119
AN2
A
2165 2168Right-handed 310
Helix 120
AN3
A
2169 2191Right-handed alpha
Helix 121
AN4
A
2194 2212Right-handed alpha
Helix 122
AN5
A
2216 2237Right-handed alpha
Helix 123
AN6
A
2243 2265Right-handed alpha
Helix 124
AN7
A
2268 2282Right-handed alpha
Helix 125
AN8
A
2289 2302Right-handed alpha
Helix 126
AN9
A
2304 2323Right-handed alpha
Helix 127
AO1
A
2327 2349Right-handed alpha
Helix 128
AO2
A
2352 2360Right-handed alpha
Helix 129
AO3
A
2360 2371Right-handed alpha
Helix 130
AO4
A
2377 2406Right-handed alpha
Helix 131
AO5
A
2407 2422Right-handed alpha
Helix 132
AO6
A
2437 2477Right-handed alpha
Helix 133
AO7
A
2480 2482Right-handed 310
Helix 134
AO8
A
2483 2493Right-handed alpha
Helix 135
AO9
A
2497 2508Right-handed alpha
Helix 136
AP1
A
2509 2511Right-handed 310
Helix 137
AP2
A
2512 2518Right-handed 310
Helix 138
AP3
A
2519 2525Right-handed alpha
Helix 139
AP4
A
2536 2552Right-handed alpha
Helix 140
AP5
A
2552 2565Right-handed alpha
Helix 141
AP6
A
2567 2573Right-handed alpha
Helix 142
AP7
A
2592 2611Right-handed alpha
Helix 143
AP8
A
2613 2632Right-handed alpha
Helix 144
AP9
A
2651 2655Right-handed 310
Helix 145
AQ1
A
2722 2741Right-handed alpha
Helix 146
AQ2
A
2742 2748Right-handed alpha
Helix 147
AQ3
A
2776 2782Right-handed alpha
Helix 148
AQ4
A
2786 2792Right-handed alpha
Helix 149
AQ5
A
2797 2807Right-handed alpha
Helix 150
AQ6
A
2812 2826Right-handed alpha
Helix 151
AQ7
A
2830 2834Right-handed 310
Helix 152
AQ8
A
2841 2867Right-handed alpha
Helix 153
AQ9
A
2872 2874Right-handed 310
Helix 154
AR1
A
2895 2899Right-handed 310
Helix 155
AR2
A
2911 2917Right-handed alpha
Helix 156
AR3
A
2925 2941Right-handed alpha
Helix 157
AR4
A
2941 2954Right-handed alpha
Helix 158
AR5
A
2963 2971Right-handed alpha
Helix 159
AR6
A
3002 3018Right-handed alpha
Helix 160
AR7
A
3027 3040Right-handed alpha
Helix 161
AR8
A
3041 3047Right-handed alpha
Helix 162
AR9
A
3048 3053Right-handed 310
Helix 163
AS1
C
6 16Right-handed alpha
Helix 164
AS2
C
21 33Right-handed alpha
Helix 165
AS3
C
35 43Right-handed alpha
Helix 166
AS4
C
57 74Right-handed alpha
Helix 167
AS5
C
88 109Right-handed alpha
Helix 168
AS6
C
116 130Right-handed alpha
Helix 169
AS7
C
134 149Right-handed alpha
Helix 170
AS8
C
152 159Right-handed alpha
Helix 171
AS9
C
160 174Right-handed alpha
Helix 172
AT1
C
182 201Right-handed alpha
Helix 173
AT2
C
206 208Right-handed 310
Helix 174
AT3
C
209 223Right-handed alpha
Helix 175
AT4
C
228 244Right-handed alpha
Helix 176
AT5
C
247 269Right-handed alpha
Helix 177
AT6
C
272 291Right-handed alpha
Helix 178
AT7
C
297 301Right-handed 310
Helix 179
AT8
C
305 324Right-handed alpha
Helix 180
AT9
C
342 357Right-handed alpha
Helix 181
AU1
C
392 403Right-handed alpha
Helix 182
AU2
C
405 408Right-handed 310
Helix 183
AU3
C
409 423Right-handed alpha
Helix 184
AU4
C
424 427Right-handed 310
Helix 185
AU5
C
428 430Right-handed 310
Helix 186
AU6
C
431 443Right-handed alpha
Helix 187
AU7
C
451 468Right-handed alpha
Helix 188
AU8
C
473 493Right-handed alpha
Helix 189
AU9
C
497 499Right-handed 310
Helix 190
AV1
C
500 514Right-handed alpha
Helix 191
AV2
C
520 528Right-handed alpha
Helix 192
AV3
C
535 548Right-handed alpha
Helix 193
AV4
C
572 581Right-handed alpha
Helix 194
AV5
C
596 601Right-handed alpha
Helix 195
AV6
C
607 617Right-handed alpha
Helix 196
AV7
C
619 629Right-handed alpha
Helix 197
AV8
C
645 656Right-handed alpha
Helix 198
AV9
C
683 704Right-handed alpha
Helix 199
AW1
C
711 732Right-handed alpha
Helix 200
AW2
C
736 742Right-handed alpha
Helix 201
AW3
C
743 766Right-handed alpha
Helix 202
AW4
C
772 787Right-handed alpha
Helix 203
AW5
C
794 807Right-handed alpha
Helix 204
AW6
C
808 825Right-handed alpha
Helix 205
AW7
C
886 890Right-handed 310
Helix 206
AW8
C
891 912Right-handed alpha
Helix 207
AW9
C
919 930Right-handed alpha
Helix 208
AX1
C
940 954Right-handed alpha
Helix 209
AX2
C
962 971Right-handed alpha
Helix 210
AX3
C
972 980Right-handed alpha
Helix 211
AX4
C
983 995Right-handed alpha
Helix 212
AX5
C
997 1002Right-handed alpha
Helix 213
AX6
C
1008 1031Right-handed alpha
Helix 214
AX7
C
1035 1053Right-handed alpha
Helix 215
AX8
C
1070 1075Right-handed alpha
Helix 216
AX9
C
1076 1080Right-handed 310
Helix 217
AY1
C
1082 1093Right-handed alpha
Helix 218
AY2
C
1094 1097Right-handed 310
Helix 219
AY3
C
1112 1133Right-handed alpha
Helix 220
AY4
C
1143 1165Right-handed alpha
Helix 221
AY5
C
1168 1183Right-handed alpha
Helix 222
AY6
C
1186 1202Right-handed alpha
Helix 223
AY7
C
1205 1225Right-handed alpha
Helix 224
AY8
C
1236 1240Right-handed 310
Helix 225
AY9
C
1243 1262Right-handed alpha
Helix 226
AZ1
C
1264 1274Right-handed alpha
Helix 227
AZ2
C
1278 1286Right-handed alpha
Helix 228
AZ3
C
1286 1292Right-handed alpha
Helix 229
AZ4
C
1294 1299Right-handed alpha
Helix 230
AZ5
C
1305 1323Right-handed alpha
Helix 231
AZ6
C
1327 1330Right-handed 310
Helix 232
AZ7
C
1331 1339Right-handed alpha
Helix 233
AZ8
C
1340 1349Right-handed alpha
Helix 234
AZ9
C
1382 1397Right-handed alpha
Helix 235
BA1
C
1403 1409Right-handed alpha
Helix 236
BA2
C
1413 1429Right-handed alpha
Helix 237
BA3
C
1431 1452Right-handed alpha
Helix 238
BA4
C
1453 1456Right-handed 310
Helix 239
BA5
C
1460 1478Right-handed alpha
Helix 240
BA6
C
1484 1509Right-handed alpha
Helix 241
BA7
C
1516 1525Right-handed alpha
Helix 242
BA8
C
1526 1528Right-handed 310
Helix 243
BA9
C
1534 1547Right-handed alpha
Helix 244
BB1
C
1552 1561Right-handed alpha
Helix 245
BB2
C
1568 1570Right-handed 310
Helix 246
BB3
C
1571 1583Right-handed alpha
Helix 247
BB4
C
1589 1602Right-handed alpha
Helix 248
BB5
C
1606 1609Right-handed 310
Helix 249
BB6
C
1610 1623Right-handed alpha
Helix 250
BB7
C
1624 1635Right-handed alpha
Helix 251
BB8
C
1636 1637Right-handed 310
Helix 252
BB9
C
1638 1641Right-handed 310
Helix 253
BC1
C
1642 1658Right-handed alpha
Helix 254
BC2
C
1663 1678Right-handed alpha
Helix 255
BC3
C
1693 1703Right-handed alpha
Helix 256
BC4
C
1705 1722Right-handed alpha
Helix 257
BC5
C
1726 1742Right-handed alpha
Helix 258
BC6
C
1743 1754Right-handed alpha
Helix 259
BC7
C
1758 1765Right-handed alpha
Helix 260
BC8
C
1785 1790Right-handed alpha
Helix 261
BC9
C
1791 1796Right-handed alpha
Helix 262
BD1
C
1801 1816Right-handed alpha
Helix 263
BD2
C
1823 1826Right-handed 310
Helix 264
BD3
C
1827 1832Right-handed alpha
Helix 265
BD4
C
1834 1852Right-handed alpha
Helix 266
BD5
C
1857 1876Right-handed alpha
Helix 267
BD6
C
1902 1918Right-handed alpha
Helix 268
BD7
C
1928 1932Right-handed 310
Helix 269
BD8
C
1937 1948Right-handed alpha
Helix 270
BD9
C
1950 1974Right-handed alpha
Helix 271
BE1
C
1985 1997Right-handed alpha
Helix 272
BE2
C
2000 2013Right-handed alpha
Helix 273
BE3
C
2015 2020Right-handed 310
Helix 274
BE4
C
2028 2039Right-handed alpha
Helix 275
BE5
C
2041 2052Right-handed alpha
Helix 276
BE6
C
2056 2071Right-handed alpha
Helix 277
BE7
C
2073 2088Right-handed alpha
Helix 278
BE8
C
2092 2107Right-handed alpha
Helix 279
BE9
C
2123 2137Right-handed alpha
Helix 280
BF1
C
2139 2161Right-handed alpha
Helix 281
BF2
C
2165 2168Right-handed 310
Helix 282
BF3
C
2169 2191Right-handed alpha
Helix 283
BF4
C
2194 2212Right-handed alpha
Helix 284
BF5
C
2216 2237Right-handed alpha
Helix 285
BF6
C
2243 2265Right-handed alpha
Helix 286
BF7
C
2268 2282Right-handed alpha
Helix 287
BF8
C
2289 2302Right-handed alpha
Helix 288
BF9
C
2304 2323Right-handed alpha
Helix 289
BG1
C
2327 2349Right-handed alpha
Helix 290
BG2
C
2352 2360Right-handed alpha
Helix 291
BG3
C
2360 2371Right-handed alpha
Helix 292
BG4
C
2377 2406Right-handed alpha
Helix 293
BG5
C
2407 2422Right-handed alpha
Helix 294
BG6
C
2437 2477Right-handed alpha
Helix 295
BG7
C
2480 2482Right-handed 310
Helix 296
BG8
C
2483 2493Right-handed alpha
Helix 297
BG9
C
2497 2508Right-handed alpha
Helix 298
BH1
C
2509 2511Right-handed 310
Helix 299
BH2
C
2512 2518Right-handed 310
Helix 300
BH3
C
2519 2525Right-handed alpha
Helix 301
BH4
C
2536 2552Right-handed alpha
Helix 302
BH5
C
2552 2565Right-handed alpha
Helix 303
BH6
C
2567 2573Right-handed alpha
Helix 304
BH7
C
2592 2611Right-handed alpha
Helix 305
BH8
C
2613 2632Right-handed alpha
Helix 306
BH9
C
2651 2655Right-handed 310
Helix 307
BI1
C
2722 2741Right-handed alpha
Helix 308
BI2
C
2742 2748Right-handed alpha
Helix 309
BI3
C
2776 2782Right-handed alpha
Helix 310
BI4
C
2786 2792Right-handed alpha
Helix 311
BI5
C
2797 2807Right-handed alpha
Helix 312
BI6
C
2812 2826Right-handed alpha
Helix 313
BI7
C
2830 2834Right-handed 310
Helix 314
BI8
C
2841 2867Right-handed alpha
Helix 315
BI9
C
2872 2874Right-handed 310
Helix 316
BJ1
C
2895 2899Right-handed 310
Helix 317
BJ2
C
2911 2917Right-handed alpha
Helix 318
BJ3
C
2925 2941Right-handed alpha
Helix 319
BJ4
C
2941 2954Right-handed alpha
Helix 320
BJ5
C
2963 2971Right-handed alpha
Helix 321
BJ6
C
3002 3018Right-handed alpha
Helix 322
BJ7
C
3027 3040Right-handed alpha
Helix 323
BJ8
C
3041 3047Right-handed alpha
Helix 324
BJ9
C
3048 3053Right-handed 310
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There are 10 sheets in PDB entry 7SID. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1060 1063first strand
Strand 2
A
1066 1069anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2645 2646first strand
Strand 2
A
2689 2692anti-parallel
Strand 3
A
2700 2706anti-parallel
Strand 4
A
2683 2686anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2645 2646first strand
Strand 2
A
2689 2692anti-parallel
Strand 3
A
2700 2706anti-parallel
Strand 4
A
2711 2718anti-parallel
Strand 5
A
2764 2768anti-parallel
Strand 6
A
2757 2759anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2773 2775first strand
Strand 2
A
2876 2879anti-parallel
Strand 3
A
2885 2887anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3020 3021first strand
Strand 2
A
3024 3025anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1060 1063first strand
Strand 2
C
1066 1069anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2645 2646first strand
Strand 2
C
2689 2692anti-parallel
Strand 3
C
2700 2706anti-parallel
Strand 4
C
2683 2686anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2645 2646first strand
Strand 2
C
2689 2692anti-parallel
Strand 3
C
2700 2706anti-parallel
Strand 4
C
2711 2718anti-parallel
Strand 5
C
2764 2768anti-parallel
Strand 6
C
2757 2759anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2773 2775first strand
Strand 2
C
2876 2879anti-parallel
Strand 3
C
2885 2887anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3020 3021first strand
Strand 2
C
3024 3025anti-parallel
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