Analysis of interatomic Contacts of Structural Units in PDB entry:
7SIP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SIP entry

There are 4 chains in PDB entry 7SIP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 212THR 489
B
 LYS 212THR 489
C
 LYS 212THR 489
D
 LYS 212THR 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 7SIP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
212 219Right-handed alpha
Helix 2
AA2
A
223 247Right-handed alpha
Helix 3
AA3
A
248 253Right-handed 310
Helix 4
AA4
A
280 300Right-handed alpha
Helix 5
AA5
A
310 329Right-handed alpha
Helix 6
AA6
A
358 367Right-handed alpha
Helix 7
AA7
A
368 378Right-handed 310
Helix 8
AA8
A
380 391Right-handed alpha
Helix 9
AA9
A
392 417Right-handed alpha
Helix 10
AB1
A
429 431Right-handed 310
Helix 11
AB2
A
432 441Right-handed alpha
Helix 12
AB3
A
452 472Right-handed alpha
Helix 13
AB4
A
473 489Right-handed alpha
Helix 14
AB5
B
213 219Right-handed alpha
Helix 15
AB6
B
223 247Right-handed alpha
Helix 16
AB7
B
248 253Right-handed 310
Helix 17
AB8
B
280 300Right-handed alpha
Helix 18
AB9
B
310 329Right-handed alpha
Helix 19
AC1
B
358 367Right-handed alpha
Helix 20
AC2
B
368 378Right-handed 310
Helix 21
AC3
B
380 391Right-handed alpha
Helix 22
AC4
B
392 417Right-handed alpha
Helix 23
AC5
B
429 431Right-handed 310
Helix 24
AC6
B
432 441Right-handed alpha
Helix 25
AC7
B
452 472Right-handed alpha
Helix 26
AC8
B
473 489Right-handed alpha
Helix 27
AC9
C
213 219Right-handed alpha
Helix 28
AD1
C
223 247Right-handed alpha
Helix 29
AD2
C
248 253Right-handed 310
Helix 30
AD3
C
280 300Right-handed alpha
Helix 31
AD4
C
310 329Right-handed alpha
Helix 32
AD5
C
358 367Right-handed alpha
Helix 33
AD6
C
368 378Right-handed 310
Helix 34
AD7
C
380 391Right-handed alpha
Helix 35
AD8
C
392 417Right-handed alpha
Helix 36
AD9
C
429 431Right-handed 310
Helix 37
AE1
C
432 441Right-handed alpha
Helix 38
AE2
C
452 472Right-handed alpha
Helix 39
AE3
C
473 489Right-handed alpha
Helix 40
AE4
D
213 219Right-handed alpha
Helix 41
AE5
D
223 247Right-handed alpha
Helix 42
AE6
D
248 253Right-handed 310
Helix 43
AE7
D
280 300Right-handed alpha
Helix 44
AE8
D
310 329Right-handed alpha
Helix 45
AE9
D
358 367Right-handed alpha
Helix 46
AF1
D
368 378Right-handed 310
Helix 47
AF2
D
380 391Right-handed alpha
Helix 48
AF3
D
392 417Right-handed alpha
Helix 49
AF4
D
429 431Right-handed 310
Helix 50
AF5
D
432 441Right-handed alpha
Helix 51
AF6
D
452 472Right-handed alpha
Helix 52
AF7
D
473 489Right-handed alpha
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There are no sheets in PDB entry 7SIP
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