Analysis of interatomic Contacts of Structural Units in PDB entry:
7SJ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SJ0 entry

There are 3 chains in PDB entry 7SJ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 14LEU 270
B
 GLN 1VAL 120
L
 VAL 3LEU 110
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 7SJ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
156 159Right-handed 310
Helix 2
AA2
B
28 32Right-handed 310
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There are 9 sheets in PDB entry 7SJ0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
62 69anti-parallel
Strand 3
A
263 269anti-parallel
Strand 4
A
89 94anti-parallel
Strand 5
A
188 197anti-parallel
Strand 6
A
205 209anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 79first strand
Strand 2
A
62 69anti-parallel
Strand 3
A
263 269anti-parallel
Strand 4
A
89 94anti-parallel
Strand 5
A
188 197anti-parallel
Strand 6
A
200 202anti-parallel
Strand 7
A
228 229anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 85first strand
Strand 2
A
237 240anti-parallel
Strand 3
A
104 107anti-parallel
Strand 4
A
116 121anti-parallel
Strand 5
A
126 131anti-parallel
Strand 6
A
170 172anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 155first strand
Strand 2
A
141 146anti-parallel
Strand 3
A
243 245parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 6first strand
Strand 2
B
18 25anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
68 73anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 11first strand
Strand 2
B
116 119parallel
Strand 3
B
92 99anti-parallel
Strand 4
B
33 40anti-parallel
Strand 5
B
44 50anti-parallel
Strand 6
B
59 60anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
11 12first strand
Strand 2
L
108 109parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
18 23first strand
Strand 2
L
71 76anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
46 50first strand
Strand 2
L
35 39anti-parallel
Strand 3
L
86 92anti-parallel
Strand 4
L
99 101anti-parallel
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