Analysis of interatomic Contacts of Structural Units in PDB entry:
7SJ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SJ4 entry

There are 2 chains in PDB entry 7SJ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 1282THR 1594
B
 MET 1LEU 177
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7SJ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1282 1325Right-handed alpha
Helix 2
AA2
A
1330 1334Right-handed 310
Helix 3
AA3
A
1336 1342Right-handed alpha
Helix 4
AA4
A
1343 1354Right-handed alpha
Helix 5
AA5
A
1354 1362Right-handed alpha
Helix 6
AA6
A
1365 1367Right-handed 310
Helix 7
AA7
A
1368 1376Right-handed alpha
Helix 8
AA8
A
1377 1379Right-handed 310
Helix 9
AA9
A
1380 1398Right-handed alpha
Helix 10
AB1
A
1403 1413Right-handed alpha
Helix 11
AB2
A
1417 1423Right-handed alpha
Helix 12
AB3
A
1423 1430Right-handed alpha
Helix 13
AB4
A
1431 1441Right-handed alpha
Helix 14
AB5
A
1446 1471Right-handed alpha
Helix 15
AB6
A
1480 1484Right-handed 310
Helix 16
AB7
A
1575 1594Right-handed alpha
Helix 17
AB8
B
12 14Right-handed 310
Helix 18
AB9
B
15 26Right-handed alpha
Helix 19
AC1
B
67 72Right-handed 310
Helix 20
AC2
B
86 96Right-handed alpha
Helix 21
AC3
B
96 105Right-handed alpha
Helix 22
AC4
B
116 120Right-handed 310
Helix 23
AC5
B
124 132Right-handed alpha
Helix 24
AC6
B
138 149Right-handed alpha
Helix 25
AC7
B
164 177Right-handed alpha
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There are 2 sheets in PDB entry 7SJ4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1473 1474first strand
Strand 2
A
1530 1538parallel
Strand 3
A
1515 1522anti-parallel
Strand 4
A
1504 1512anti-parallel
Strand 5
A
1486 1495anti-parallel
Strand 6
A
1569 1572anti-parallel
Strand 7
A
1554 1559anti-parallel
Strand 8
A
1542 1545anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 46first strand
Strand 2
B
49 57anti-parallel
Strand 3
B
2 10parallel
Strand 4
B
77 83parallel
Strand 5
B
110 115parallel
Strand 6
B
153 156parallel
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