Analysis of interatomic Contacts of Structural Units in PDB entry:
7SLP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SLP entry

There are 3 chains in PDB entry 7SLP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 414SER 686
B
 SER 29GLN 571
R
 A 296 U 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7SLP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
432 437Right-handed alpha
Helix 2
AA2
A
438 442Right-handed 310
Helix 3
AA3
A
455 465Right-handed alpha
Helix 4
AA4
A
476 492Right-handed alpha
Helix 5
AA5
A
524 532Right-handed alpha
Helix 6
AA6
A
564 569Right-handed alpha
Helix 7
AA7
A
583 592Right-handed alpha
Helix 8
AA8
A
593 606Right-handed alpha
Helix 9
AA9
A
630 638Right-handed alpha
Helix 10
AB1
A
646 653Right-handed alpha
Helix 11
AB2
B
30 46Right-handed alpha
Helix 12
AB3
B
47 54Right-handed alpha
Helix 13
AB4
B
55 63Right-handed alpha
Helix 14
AB5
B
71 76Right-handed alpha
Helix 15
AB6
B
77 82Right-handed alpha
Helix 16
AB7
B
86 94Right-handed alpha
Helix 17
AB8
B
121 125Right-handed alpha
Helix 18
AB9
B
137 146Right-handed alpha
Helix 19
AC1
B
176 186Right-handed alpha
Helix 20
AC2
B
381 413Right-handed alpha
Helix 21
AC3
B
467 479Right-handed alpha
Helix 22
AC4
B
499 508Right-handed alpha
Helix 23
AC5
B
509 515Right-handed alpha
Helix 24
AC6
B
526 545Right-handed alpha
Helix 25
AC7
B
552 571Right-handed alpha
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There are 4 sheets in PDB entry 7SLP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
554 557first strand
Strand 2
A
470 474parallel
Strand 3
A
447 450parallel
Strand 4
A
575 581parallel
Strand 5
A
607 616parallel
Strand 6
A
679 682anti-parallel
Strand 7
A
660 662anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 70first strand
Strand 2
B
108 110anti-parallel
Strand 3
B
101 102anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 155first strand
Strand 2
B
168 172anti-parallel
Strand 3
B
126 130anti-parallel
Strand 4
B
378 380anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
481 485first strand
Strand 2
B
492 497anti-parallel
Strand 3
B
456 461anti-parallel
Strand 4
B
519 523anti-parallel
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