Analysis of interatomic Contacts of Structural Units in PDB entry:
7SOY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SOY entry

There are 4 chains in PDB entry 7SOY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7ALA 589
B
 PRO 34GLN 402
C
 PHE 6PRO 293
P
 ARG 37ILE 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 91 helices in PDB entry 7SOY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 22Right-handed alpha
Helix 2
AA2
A
24 34Right-handed alpha
Helix 3
AA3
A
34 42Right-handed alpha
Helix 4
AA4
A
43 50Right-handed alpha
Helix 5
AA5
A
50 59Right-handed alpha
Helix 6
AA6
A
62 76Right-handed alpha
Helix 7
AA7
A
81 84Right-handed 310
Helix 8
AA8
A
85 99Right-handed alpha
Helix 9
AA9
A
101 119Right-handed alpha
Helix 10
AB1
A
120 127Right-handed alpha
Helix 11
AB2
A
127 137Right-handed alpha
Helix 12
AB3
A
140 155Right-handed alpha
Helix 13
AB4
A
159 175Right-handed alpha
Helix 14
AB5
A
178 196Right-handed alpha
Helix 15
AB6
A
197 214Right-handed alpha
Helix 16
AB7
A
217 235Right-handed alpha
Helix 17
AB8
A
236 241Right-handed alpha
Helix 18
AB9
A
244 253Right-handed alpha
Helix 19
AC1
A
256 266Right-handed alpha
Helix 20
AC2
A
266 275Right-handed alpha
Helix 21
AC3
A
275 282Right-handed alpha
Helix 22
AC4
A
282 292Right-handed alpha
Helix 23
AC5
A
295 305Right-handed alpha
Helix 24
AC6
A
305 313Right-handed alpha
Helix 25
AC7
A
317 325Right-handed alpha
Helix 26
AC8
A
325 335Right-handed alpha
Helix 27
AC9
A
338 350Right-handed alpha
Helix 28
AD1
A
351 357Right-handed alpha
Helix 29
AD2
A
357 364Right-handed alpha
Helix 30
AD3
A
364 374Right-handed alpha
Helix 31
AD4
A
377 387Right-handed alpha
Helix 32
AD5
A
388 395Right-handed alpha
Helix 33
AD6
A
396 413Right-handed alpha
Helix 34
AD7
A
416 435Right-handed alpha
Helix 35
AD8
A
435 442Right-handed alpha
Helix 36
AD9
A
442 452Right-handed alpha
Helix 37
AE1
A
455 474Right-handed alpha
Helix 38
AE2
A
474 481Right-handed alpha
Helix 39
AE3
A
481 490Right-handed alpha
Helix 40
AE4
A
494 513Right-handed alpha
Helix 41
AE5
A
513 520Right-handed alpha
Helix 42
AE6
A
520 529Right-handed alpha
Helix 43
AE7
A
533 548Right-handed alpha
Helix 44
AE8
A
552 559Right-handed alpha
Helix 45
AE9
A
559 569Right-handed alpha
Helix 46
AF1
A
572 586Right-handed alpha
Helix 47
AF2
B
35 51Right-handed alpha
Helix 48
AF3
B
62 83Right-handed alpha
Helix 49
AF4
B
90 104Right-handed alpha
Helix 50
AF5
B
130 147Right-handed alpha
Helix 51
AF6
B
151 156Right-handed alpha
Helix 52
AF7
B
160 170Right-handed alpha
Helix 53
AF8
B
171 173Right-handed 310
Helix 54
AF9
B
175 193Right-handed alpha
Helix 55
AG1
B
196 214Right-handed alpha
Helix 56
AG2
B
220 234Right-handed alpha
Helix 57
AG3
B
240 250Right-handed alpha
Helix 58
AG4
B
250 257Right-handed alpha
Helix 59
AG5
B
259 278Right-handed alpha
Helix 60
AG6
B
281 292Right-handed alpha
Helix 61
AG7
B
297 315Right-handed alpha
Helix 62
AG8
B
316 336Right-handed alpha
Helix 63
AG9
B
339 352Right-handed alpha
Helix 64
AH1
B
352 362Right-handed alpha
Helix 65
AH2
B
362 380Right-handed alpha
Helix 66
AH3
B
383 401Right-handed alpha
Helix 67
AH4
C
7 19Right-handed alpha
Helix 68
AH5
C
24 40Right-handed alpha
Helix 69
AH6
C
61 73Right-handed alpha
Helix 70
AH7
C
92 107Right-handed alpha
Helix 71
AH8
C
120 127Right-handed alpha
Helix 72
AH9
C
128 138Right-handed alpha
Helix 73
AI1
C
140 153Right-handed alpha
Helix 74
AI2
C
176 183Right-handed alpha
Helix 75
AI3
C
192 201Right-handed alpha
Helix 76
AI4
C
221 233Right-handed alpha
Helix 77
AI5
C
264 268Right-handed 310
Helix 78
AI6
P
45 50Right-handed alpha
Helix 79
AI7
P
88 91Right-handed 310
Helix 80
AI8
P
92 103Right-handed alpha
Helix 81
AI9
P
127 143Right-handed alpha
Helix 82
AJ1
P
156 169Right-handed alpha
Helix 83
AJ2
P
183 190Right-handed alpha
Helix 84
AJ3
P
190 200Right-handed alpha
Helix 85
AJ4
P
207 219Right-handed alpha
Helix 86
AJ5
P
223 234Right-handed alpha
Helix 87
AJ6
P
290 302Right-handed alpha
Helix 88
AJ7
P
304 312Right-handed alpha
Helix 89
AJ8
P
327 336Right-handed alpha
Helix 90
AJ9
P
350 355Right-handed alpha
Helix 91
AK1
P
355 370Right-handed alpha
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There are 6 sheets in PDB entry 7SOY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 48first strand
Strand 2
C
156 159parallel
Strand 3
C
163 165anti-parallel
Strand 4
C
236 239parallel
Strand 5
C
256 259parallel
Strand 6
C
248 251anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 113first strand
Strand 2
C
80 84parallel
Strand 3
C
52 57parallel
Strand 4
C
273 278anti-parallel
Strand 5
C
284 289anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
210 211first strand
Strand 2
C
218 219anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
52 54first strand
Strand 2
P
69 72anti-parallel
Strand 3
P
107 109anti-parallel
Strand 4
P
78 82parallel
Strand 5
P
150 155parallel
Strand 6
P
177 180parallel
Strand 7
P
316 320parallel
Strand 8
P
340 343parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
57 59first strand
Strand 2
P
64 66anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
235 237first strand
Strand 2
P
285 287anti-parallel
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