Analysis of interatomic Contacts of Structural Units in PDB entry:
7SPY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SPY entry

There is 1 chain in PDB entry 7SPY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA -2ALA 346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 7SPY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 11Right-handed alpha
Helix 2
AA2
A
26 42Right-handed alpha
Helix 3
AA3
A
57 63Right-handed alpha
Helix 4
AA4
A
116 130Right-handed alpha
Helix 5
AA5
A
139 157Right-handed alpha
Helix 6
AA6
A
176 194Right-handed alpha
Helix 7
AA7
A
197 207Right-handed alpha
Helix 8
AA8
A
209 234Right-handed alpha
Helix 9
AA9
A
249 266Right-handed alpha
Helix 10
AB1
A
287 308Right-handed alpha
Helix 11
AB2
A
325 338Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7SPY.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 73first strand
Strand 2
A
76 83anti-parallel
Strand 3
A
47 51parallel
Strand 4
A
160 164parallel
Strand 5
A
16 20parallel
Strand 6
A
240 246parallel
Strand 7
A
272 278parallel
Strand 8
A
312 317parallel
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