Analysis of interatomic Contacts of Structural Units in PDB entry:
7SQK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SQK entry

There are 8 chains in PDB entry 7SQK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 278
B
 MET 1ASP 215
C
 MET 1ASP 603
D
 PRO 25ARG 318
E
 MET 1SER 633
F
 MET 1GLY 385
G
 TYR 25LYS 368
H
 SER 139GLY 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are104 helices in PDB entry 7SQK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 19Right-handed alpha
Helix 2
AA2
A
30 80Right-handed alpha
Helix 3
AA3
A
83 87Right-handed 310
Helix 4
AA4
A
88 106Right-handed alpha
Helix 5
AA5
A
111 131Right-handed alpha
Helix 6
AA6
A
133 207Right-handed alpha
Helix 7
AA7
A
213 239Right-handed alpha
Helix 8
AA8
A
247 269Right-handed alpha
Helix 9
AA9
A
269 278Right-handed alpha
Helix 10
AB1
B
14 25Right-handed alpha
Helix 11
AB2
B
31 36Right-handed alpha
Helix 12
AB3
B
44 76Right-handed alpha
Helix 13
AB4
B
81 104Right-handed alpha
Helix 14
AB5
B
105 114Right-handed alpha
Helix 15
AB6
B
128 145Right-handed alpha
Helix 16
AB7
B
145 156Right-handed alpha
Helix 17
AB8
B
160 213Right-handed alpha
Helix 18
AB9
C
3 14Right-handed alpha
Helix 19
AC1
C
18 22Right-handed 310
Helix 20
AC2
C
24 28Right-handed 310
Helix 21
AC3
C
33 47Right-handed alpha
Helix 22
AC4
C
48 52Right-handed 310
Helix 23
AC5
C
54 68Right-handed alpha
Helix 24
AC6
C
74 87Right-handed alpha
Helix 25
AC7
C
95 181Right-handed alpha
Helix 26
AC8
C
194 199Right-handed 310
Helix 27
AC9
C
200 226Right-handed alpha
Helix 28
AD1
C
251 303Right-handed alpha
Helix 29
AD2
C
306 330Right-handed alpha
Helix 30
AD3
C
335 346Right-handed alpha
Helix 31
AD4
C
348 421Right-handed alpha
Helix 32
AD5
C
445 457Right-handed alpha
Helix 33
AD6
C
458 460Right-handed 310
Helix 34
AD7
C
467 516Right-handed alpha
Helix 35
AD8
C
525 563Right-handed alpha
Helix 36
AD9
C
563 578Right-handed alpha
Helix 37
AE1
C
579 603Right-handed alpha
Helix 38
AE2
D
30 37Right-handed alpha
Helix 39
AE3
D
37 47Right-handed alpha
Helix 40
AE4
D
57 101Right-handed alpha
Helix 41
AE5
D
106 111Right-handed alpha
Helix 42
AE6
D
112 139Right-handed alpha
Helix 43
AE7
D
146 205Right-handed alpha
Helix 44
AE8
D
210 246Right-handed alpha
Helix 45
AE9
D
247 285Right-handed alpha
Helix 46
AF1
D
286 318Right-handed alpha
Helix 47
AF2
E
2 17Right-handed alpha
Helix 48
AF3
E
27 36Right-handed alpha
Helix 49
AF4
E
38 50Right-handed alpha
Helix 50
AF5
E
52 70Right-handed alpha
Helix 51
AF6
E
71 158Right-handed alpha
Helix 52
AF7
E
159 166Right-handed alpha
Helix 53
AF8
E
182 203Right-handed alpha
Helix 54
AF9
E
216 238Right-handed alpha
Helix 55
AG1
E
239 263Right-handed alpha
Helix 56
AG2
E
264 267Right-handed 310
Helix 57
AG3
E
289 332Right-handed alpha
Helix 58
AG4
E
335 416Right-handed alpha
Helix 59
AG5
E
416 428Right-handed alpha
Helix 60
AG6
E
428 453Right-handed alpha
Helix 61
AG7
E
477 482Right-handed alpha
Helix 62
AG8
E
487 500Right-handed alpha
Helix 63
AG9
E
507 509Right-handed 310
Helix 64
AH1
E
510 532Right-handed alpha
Helix 65
AH2
E
533 542Right-handed alpha
Helix 66
AH3
E
548 598Right-handed alpha
Helix 67
AH4
E
600 604Right-handed 310
Helix 68
AH5
E
613 633Right-handed alpha
Helix 69
AH6
F
2 21Right-handed alpha
Helix 70
AH7
F
24 33Right-handed alpha
Helix 71
AH8
F
51 66Right-handed alpha
Helix 72
AH9
F
66 74Right-handed alpha
Helix 73
AI1
F
82 105Right-handed alpha
Helix 74
AI2
F
112 118Right-handed alpha
Helix 75
AI3
F
121 143Right-handed alpha
Helix 76
AI4
F
151 156Right-handed alpha
Helix 77
AI5
F
161 218Right-handed alpha
Helix 78
AI6
F
223 225Right-handed 310
Helix 79
AI7
F
226 247Right-handed alpha
Helix 80
AI8
F
248 259Right-handed alpha
Helix 81
AI9
F
277 287Right-handed alpha
Helix 82
AJ1
F
303 325Right-handed alpha
Helix 83
AJ2
F
333 385Right-handed alpha
Helix 84
AJ3
G
27 48Right-handed alpha
Helix 85
AJ4
G
60 69Right-handed alpha
Helix 86
AJ5
G
72 87Right-handed alpha
Helix 87
AJ6
G
87 97Right-handed alpha
Helix 88
AJ7
G
101 115Right-handed alpha
Helix 89
AJ8
G
123 129Right-handed alpha
Helix 90
AJ9
G
132 157Right-handed alpha
Helix 91
AK1
G
159 179Right-handed alpha
Helix 92
AK2
G
183 189Right-handed alpha
Helix 93
AK3
G
199 206Right-handed alpha
Helix 94
AK4
G
216 249Right-handed alpha
Helix 95
AK5
G
250 255Right-handed alpha
Helix 96
AK6
G
256 259Right-handed 310
Helix 97
AK7
G
260 289Right-handed alpha
Helix 98
AK8
G
289 294Right-handed alpha
Helix 99
AK9
G
301 309Right-handed 310
Helix 100
AL1
G
311 344Right-handed alpha
Helix 101
AL2
G
352 366Right-handed alpha
Helix 102
AL3
H
141 245Right-handed alpha
Helix 103
AL4
H
257 279Right-handed alpha
Helix 104
AL5
H
284 338Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7SQK.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
297 298first strand
Strand 2
F
301 302anti-parallel
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