Analysis of interatomic Contacts of Structural Units in PDB entry:
7SS7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SS7 entry

There is 1 chain in PDB entry 7SS7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2SER 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 7SS7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 28Right-handed alpha
Helix 2
AA2
A
29 33Right-handed 310
Helix 3
AA3
A
53 69Right-handed alpha
Helix 4
AA4
A
85 93Right-handed alpha
Helix 5
AA5
A
115 119Right-handed 310
Helix 6
AA6
A
122 133Right-handed alpha
Helix 7
AA7
A
134 144Right-handed alpha
Helix 8
AA8
A
145 157Right-handed alpha
Helix 9
AA9
A
175 186Right-handed alpha
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There are 2 sheets in PDB entry 7SS7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
73 75parallel
Strand 3
A
35 38parallel
Strand 4
A
3 6parallel
Strand 5
A
223 228anti-parallel
Strand 6
A
233 238anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 105first strand
Strand 2
A
108 113anti-parallel
Strand 3
A
190 193parallel
Strand 4
A
209 215parallel
Strand 5
A
200 206anti-parallel
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