Analysis of interatomic Contacts of Structural Units in PDB entry:
7SSG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SSG entry

There are 3 chains in PDB entry 7SSG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 575GLY 956
B
 T 2 A 30
C
 T 1 C 18
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7SSG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
586 595Right-handed alpha
Helix 2
AA2
A
602 618Right-handed alpha
Helix 3
AA3
A
637 640Right-handed 310
Helix 4
AA4
A
641 648Right-handed alpha
Helix 5
AA5
A
659 673Right-handed alpha
Helix 6
AA6
A
688 702Right-handed alpha
Helix 7
AA7
A
737 744Right-handed alpha
Helix 8
AA8
A
761 768Right-handed alpha
Helix 9
AA9
A
794 806Right-handed alpha
Helix 10
AB1
A
821 833Right-handed alpha
Helix 11
AB2
A
846 860Right-handed alpha
Helix 12
AB3
A
892 900Right-handed alpha
Helix 13
AB4
A
925 935Right-handed alpha
Helix 14
AB5
A
936 941Right-handed alpha
Helix 15
AB6
A
942 954Right-handed alpha
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There are 3 sheets in PDB entry 7SSG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
624 625first strand
Strand 2
A
772 773parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
681 682first strand
Strand 2
A
706 708parallel
Strand 3
A
651 655parallel
Strand 4
A
723 728parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
786 788first strand
Strand 2
A
910 914parallel
Strand 3
A
882 885parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il