Analysis of interatomic Contacts of Structural Units in PDB entry:
7STE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7STE entry

There are 5 chains in PDB entry 7STE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 7ASN 321
C
 ASN 12THR 335
D
 GLN 24LEU 353
E
 MET 1ASP 354
A
 GLY 63TYR 584
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 95 helices in PDB entry 7STE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
10 15Right-handed alpha
Helix 2
AA2
B
26 40Right-handed alpha
Helix 3
AA3
B
54 67Right-handed alpha
Helix 4
AA4
B
85 99Right-handed alpha
Helix 5
AA5
B
120 134Right-handed alpha
Helix 6
AA6
B
151 158Right-handed alpha
Helix 7
AA7
B
166 183Right-handed alpha
Helix 8
AA8
B
187 199Right-handed alpha
Helix 9
AA9
B
201 216Right-handed alpha
Helix 10
AB1
B
220 229Right-handed alpha
Helix 11
AB2
B
232 242Right-handed alpha
Helix 12
AB3
B
244 256Right-handed alpha
Helix 13
AB4
B
262 276Right-handed alpha
Helix 14
AB5
B
281 301Right-handed alpha
Helix 15
AB6
B
305 321Right-handed alpha
Helix 16
AB7
C
14 19Right-handed alpha
Helix 17
AB8
C
23 27Right-handed 310
Helix 18
AB9
C
30 44Right-handed alpha
Helix 19
AC1
C
58 72Right-handed alpha
Helix 20
AC2
C
74 78Right-handed alpha
Helix 21
AC3
C
89 103Right-handed alpha
Helix 22
AC4
C
118 122Right-handed 310
Helix 23
AC5
C
123 137Right-handed alpha
Helix 24
AC6
C
149 153Right-handed 310
Helix 25
AC7
C
154 161Right-handed alpha
Helix 26
AC8
C
170 185Right-handed alpha
Helix 27
AC9
C
190 202Right-handed alpha
Helix 28
AD1
C
204 219Right-handed alpha
Helix 29
AD2
C
228 237Right-handed alpha
Helix 30
AD3
C
240 254Right-handed alpha
Helix 31
AD4
C
255 271Right-handed alpha
Helix 32
AD5
C
273 286Right-handed alpha
Helix 33
AD6
C
293 312Right-handed alpha
Helix 34
AD7
C
315 333Right-handed alpha
Helix 35
AD8
D
26 31Right-handed alpha
Helix 36
AD9
D
35 39Right-handed 310
Helix 37
AE1
D
42 56Right-handed alpha
Helix 38
AE2
D
70 81Right-handed alpha
Helix 39
AE3
D
87 91Right-handed alpha
Helix 40
AE4
D
104 116Right-handed alpha
Helix 41
AE5
D
122 129Right-handed alpha
Helix 42
AE6
D
141 145Right-handed 310
Helix 43
AE7
D
146 160Right-handed alpha
Helix 44
AE8
D
172 176Right-handed 310
Helix 45
AE9
D
177 182Right-handed alpha
Helix 46
AF1
D
193 209Right-handed alpha
Helix 47
AF2
D
215 225Right-handed alpha
Helix 48
AF3
D
227 246Right-handed alpha
Helix 49
AF4
D
252 261Right-handed alpha
Helix 50
AF5
D
264 278Right-handed alpha
Helix 51
AF6
D
279 292Right-handed alpha
Helix 52
AF7
D
296 310Right-handed alpha
Helix 53
AF8
D
315 335Right-handed alpha
Helix 54
AF9
D
338 352Right-handed alpha
Helix 55
AG1
E
3 8Right-handed alpha
Helix 56
AG2
E
12 16Right-handed 310
Helix 57
AG3
E
19 31Right-handed alpha
Helix 58
AG4
E
32 36Right-handed 310
Helix 59
AG5
E
48 62Right-handed alpha
Helix 60
AG6
E
97 101Right-handed 310
Helix 61
AG7
E
105 119Right-handed alpha
Helix 62
AG8
E
143 146Right-handed 310
Helix 63
AG9
E
147 161Right-handed alpha
Helix 64
AH1
E
178 185Right-handed alpha
Helix 65
AH2
E
194 210Right-handed alpha
Helix 66
AH3
E
216 227Right-handed alpha
Helix 67
AH4
E
229 244Right-handed alpha
Helix 68
AH5
E
257 273Right-handed alpha
Helix 69
AH6
E
275 292Right-handed alpha
Helix 70
AH7
E
295 309Right-handed alpha
Helix 71
AH8
E
314 335Right-handed alpha
Helix 72
AH9
E
337 354Right-handed alpha
Helix 73
AI1
A
65 70Right-handed alpha
Helix 74
AI2
A
81 96Right-handed alpha
Helix 75
AI3
A
114 131Right-handed alpha
Helix 76
AI4
A
165 176Right-handed alpha
Helix 77
AI5
A
177 181Right-handed 310
Helix 78
AI6
A
194 211Right-handed alpha
Helix 79
AI7
A
245 250Right-handed alpha
Helix 80
AI8
A
251 256Right-handed alpha
Helix 81
AI9
A
269 292Right-handed alpha
Helix 82
AJ1
A
296 308Right-handed alpha
Helix 83
AJ2
A
310 324Right-handed alpha
Helix 84
AJ3
A
335 348Right-handed alpha
Helix 85
AJ4
A
355 367Right-handed alpha
Helix 86
AJ5
A
368 373Right-handed alpha
Helix 87
AJ6
A
374 384Right-handed alpha
Helix 88
AJ7
A
385 391Right-handed 310
Helix 89
AJ8
A
393 410Right-handed alpha
Helix 90
AJ9
A
413 430Right-handed alpha
Helix 91
AK1
A
445 472Right-handed alpha
Helix 92
AK2
A
476 483Right-handed alpha
Helix 93
AK3
A
486 503Right-handed alpha
Helix 94
AK4
A
525 529Right-handed 310
Helix 95
AK5
A
565 584Right-handed alpha
Back to top of page

There are 7 sheets in PDB entry 7STE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 78first strand
Strand 2
B
109 113parallel
Strand 3
B
138 144parallel
Strand 4
B
45 48parallel
Strand 5
B
159 162parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
79 83first strand
Strand 2
C
112 117parallel
Strand 3
C
141 147parallel
Strand 4
C
49 52parallel
Strand 5
C
162 165parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
188 189first strand
Strand 2
C
226 227parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
92 95first strand
Strand 2
D
135 139parallel
Strand 3
D
164 170parallel
Strand 4
D
61 64parallel
Strand 5
D
185 188parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
69 76first strand
Strand 2
E
82 89anti-parallel
Strand 3
E
93 96anti-parallel
Strand 4
E
136 141parallel
Strand 5
E
165 171parallel
Strand 6
E
39 42parallel
Strand 7
E
186 189parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
212 213first strand
Strand 2
E
247 248parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 185first strand
Strand 2
A
219 224parallel
Strand 3
A
104 109parallel
Strand 4
A
261 264parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il