Analysis of interatomic Contacts of Structural Units in PDB entry:
7STL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7STL entry

There are 2 chains in PDB entry 7STL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 134LYS 1002
B
 GLN 134LYS 1002
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 7STL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
142 144Right-handed 310
Helix 2
AA2
A
145 155Right-handed alpha
Helix 3
AA3
A
242 246Right-handed 310
Helix 4
AA4
A
254 261Right-handed alpha
Helix 5
AA5
A
274 278Right-handed alpha
Helix 6
AA6
A
299 304Right-handed alpha
Helix 7
AA7
A
322 343Right-handed alpha
Helix 8
AA8
A
352 355Right-handed 310
Helix 9
AA9
A
370 381Right-handed alpha
Helix 10
AB1
A
439 451Right-handed alpha
Helix 11
AB2
A
451 457Right-handed alpha
Helix 12
AB3
A
473 485Right-handed alpha
Helix 13
AB4
A
507 532Right-handed alpha
Helix 14
AB5
A
545 550Right-handed alpha
Helix 15
AB6
A
557 569Right-handed alpha
Helix 16
AB7
A
580 590Right-handed alpha
Helix 17
AB8
A
593 598Right-handed alpha
Helix 18
AB9
A
599 602Right-handed 310
Helix 19
AC1
A
603 613Right-handed alpha
Helix 20
AC2
A
636 661Right-handed alpha
Helix 21
AC3
A
662 667Right-handed 310
Helix 22
AC4
A
671 694Right-handed alpha
Helix 23
AC5
A
694 710Right-handed alpha
Helix 24
AC6
A
719 745Right-handed alpha
Helix 25
AC7
A
750 787Right-handed alpha
Helix 26
AC8
A
791 798Right-handed alpha
Helix 27
AC9
A
798 822Right-handed alpha
Helix 28
AD1
A
826 831Right-handed alpha
Helix 29
AD2
A
831 853Right-handed alpha
Helix 30
AD3
A
888 905Right-handed alpha
Helix 31
AD4
A
917 946Right-handed alpha
Helix 32
AD5
A
948 954Right-handed 310
Helix 33
AD6
A
957 1002Right-handed alpha
Helix 34
AD7
B
142 144Right-handed 310
Helix 35
AD8
B
145 155Right-handed alpha
Helix 36
AD9
B
242 246Right-handed 310
Helix 37
AE1
B
254 261Right-handed alpha
Helix 38
AE2
B
274 278Right-handed alpha
Helix 39
AE3
B
299 304Right-handed alpha
Helix 40
AE4
B
322 343Right-handed alpha
Helix 41
AE5
B
352 355Right-handed 310
Helix 42
AE6
B
370 381Right-handed alpha
Helix 43
AE7
B
439 451Right-handed alpha
Helix 44
AE8
B
451 457Right-handed alpha
Helix 45
AE9
B
473 485Right-handed alpha
Helix 46
AF1
B
507 532Right-handed alpha
Helix 47
AF2
B
545 550Right-handed alpha
Helix 48
AF3
B
557 569Right-handed alpha
Helix 49
AF4
B
580 590Right-handed alpha
Helix 50
AF5
B
593 598Right-handed alpha
Helix 51
AF6
B
599 602Right-handed 310
Helix 52
AF7
B
603 613Right-handed alpha
Helix 53
AF8
B
636 661Right-handed alpha
Helix 54
AF9
B
662 667Right-handed 310
Helix 55
AG1
B
671 694Right-handed alpha
Helix 56
AG2
B
694 710Right-handed alpha
Helix 57
AG3
B
719 745Right-handed alpha
Helix 58
AG4
B
750 787Right-handed alpha
Helix 59
AG5
B
791 798Right-handed alpha
Helix 60
AG6
B
798 822Right-handed alpha
Helix 61
AG7
B
826 831Right-handed alpha
Helix 62
AG8
B
831 853Right-handed alpha
Helix 63
AG9
B
888 905Right-handed alpha
Helix 64
AH1
B
917 946Right-handed alpha
Helix 65
AH2
B
948 954Right-handed 310
Helix 66
AH3
B
957 1002Right-handed alpha
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There are 6 sheets in PDB entry 7STL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 240first strand
Strand 2
B
881 882anti-parallel
Strand 3
B
872 875anti-parallel
Strand 4
A
391 392parallel
Strand 5
A
395 396anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 252first strand
Strand 2
A
279 285anti-parallel
Strand 3
A
399 406anti-parallel
Strand 4
A
428 435anti-parallel
Strand 5
A
357 363parallel
Strand 6
A
312 318parallel
Strand 7
A
461 465parallel
Strand 8
A
541 544anti-parallel
Strand 9
A
488 497anti-parallel
Strand 10
A
620 631parallel
Strand 11
A
469 470anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 413first strand
Strand 2
A
418 421anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 240first strand
Strand 2
A
881 882anti-parallel
Strand 3
A
872 875anti-parallel
Strand 4
B
391 392parallel
Strand 5
B
395 396anti-parallel
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There are 11 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 252first strand
Strand 2
B
279 285anti-parallel
Strand 3
B
399 406anti-parallel
Strand 4
B
428 435anti-parallel
Strand 5
B
357 363parallel
Strand 6
B
312 318parallel
Strand 7
B
461 465parallel
Strand 8
B
541 544anti-parallel
Strand 9
B
488 497anti-parallel
Strand 10
B
620 631parallel
Strand 11
B
469 470anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
409 413first strand
Strand 2
B
418 421anti-parallel
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