Analysis of interatomic Contacts of Structural Units in PDB entry:
7STV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7STV entry

There are 2 chains in PDB entry 7STV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 1VAL 50
A
 SER 52ALA 440
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7STV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 22Right-handed 310
Helix 2
AA2
A
28 37Right-handed alpha
Helix 3
AA3
A
50 61Right-handed alpha
Helix 4
AA4
A
63 68Right-handed alpha
Helix 5
AA5
A
75 79Right-handed 310
Helix 6
AA6
A
90 97Right-handed alpha
Helix 7
AA7
A
160 176Right-handed alpha
Helix 8
AA8
A
197 213Right-handed alpha
Helix 9
AA9
A
215 221Right-handed alpha
Helix 10
AB1
A
235 259Right-handed alpha
Helix 11
AB2
A
293 297Right-handed alpha
Helix 12
AB3
A
323 332Right-handed alpha
Helix 13
AB4
A
346 351Right-handed alpha
Helix 14
AB5
A
371 374Right-handed 310
Helix 15
AB6
A
414 432Right-handed alpha
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There are 3 sheets in PDB entry 7STV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 130first strand
Strand 2
A
101 106parallel
Strand 3
A
181 186parallel
Strand 4
A
4 10parallel
Strand 5
A
265 271parallel
Strand 6
A
298 304anti-parallel
Strand 7
A
39 45anti-parallel
Strand 8
A
313 315parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 130first strand
Strand 2
A
101 106parallel
Strand 3
A
181 186parallel
Strand 4
A
4 10parallel
Strand 5
A
265 271parallel
Strand 6
A
298 304anti-parallel
Strand 7
A
39 45anti-parallel
Strand 8
A
319 320parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 364first strand
Strand 2
A
376 381anti-parallel
Strand 3
A
384 389anti-parallel
Strand 4
A
394 399anti-parallel
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