Analysis of interatomic Contacts of Structural Units in PDB entry:
7SV2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7SV2 entry

There are 3 chains in PDB entry 7SV2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 23	ARG 495
B	ALA 23	ASP 496
C	THR 29	ASP 357

There are 88 helices in PDB entry 7SV2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	31	36	Right-handed alpha
Helix 2	AA2	A	49	55	Right-handed 310
Helix 3	AA3	A	56	69	Right-handed alpha
Helix 4	AA4	A	86	95	Right-handed alpha
Helix 5	AA5	A	111	117	Right-handed 310
Helix 6	AA6	A	122	134	Right-handed alpha
Helix 7	AA7	A	135	137	Right-handed 310
Helix 8	AA8	A	138	165	Right-handed alpha
Helix 9	AA9	A	172	190	Right-handed alpha
Helix 10	AB1	A	201	207	Right-handed alpha
Helix 11	AB2	A	213	216	Right-handed 310
Helix 12	AB3	A	217	226	Right-handed alpha
Helix 13	AB4	A	229	236	Right-handed alpha
Helix 14	AB5	A	242	263	Right-handed alpha
Helix 15	AB6	A	270	281	Right-handed alpha
Helix 16	AB7	A	291	324	Right-handed alpha
Helix 17	AB8	A	324	339	Right-handed alpha
Helix 18	AB9	A	346	353	Right-handed alpha
Helix 19	AC1	A	353	367	Right-handed alpha
Helix 20	AC2	A	397	403	Right-handed alpha
Helix 21	AC3	A	415	420	Right-handed 310
Helix 22	AC4	A	443	461	Right-handed alpha
Helix 23	AC5	B	31	37	Right-handed alpha
Helix 24	AC6	B	49	55	Right-handed 310
Helix 25	AC7	B	56	69	Right-handed alpha
Helix 26	AC8	B	86	95	Right-handed alpha
Helix 27	AC9	B	111	117	Right-handed 310
Helix 28	AD1	B	122	134	Right-handed alpha
Helix 29	AD2	B	135	138	Right-handed 310
Helix 30	AD3	B	139	166	Right-handed alpha
Helix 31	AD4	B	172	190	Right-handed alpha
Helix 32	AD5	B	201	207	Right-handed alpha
Helix 33	AD6	B	213	216	Right-handed 310
Helix 34	AD7	B	217	226	Right-handed alpha
Helix 35	AD8	B	228	236	Right-handed alpha
Helix 36	AD9	B	242	260	Right-handed alpha
Helix 37	AE1	B	270	277	Right-handed alpha
Helix 38	AE2	B	291	324	Right-handed alpha
Helix 39	AE3	B	324	339	Right-handed alpha
Helix 40	AE4	B	340	343	Right-handed 310
Helix 41	AE5	B	346	352	Right-handed alpha
Helix 42	AE6	B	353	367	Right-handed alpha
Helix 43	AE7	B	397	403	Right-handed alpha
Helix 44	AE8	B	415	420	Right-handed 310
Helix 45	AE9	B	443	461	Right-handed alpha
Helix 46	AF1	C	31	37	Right-handed alpha
Helix 47	AF2	C	49	55	Right-handed 310
Helix 48	AF3	C	56	69	Right-handed alpha
Helix 49	AF4	C	86	95	Right-handed alpha
Helix 50	AF5	C	111	117	Right-handed 310
Helix 51	AF6	C	122	134	Right-handed alpha
Helix 52	AF7	C	135	137	Right-handed 310
Helix 53	AF8	C	138	165	Right-handed alpha
Helix 54	AF9	C	172	190	Right-handed alpha
Helix 55	AG1	C	203	210	Right-handed 310
Helix 56	AG2	C	213	216	Right-handed 310
Helix 57	AG3	C	217	226	Right-handed alpha
Helix 58	AG4	C	229	236	Right-handed alpha
Helix 59	AG5	C	242	260	Right-handed alpha
Helix 60	AG6	C	271	281	Right-handed alpha
Helix 61	AG7	C	291	324	Right-handed alpha
Helix 62	AG8	C	324	339	Right-handed alpha
Helix 63	AG9	C	346	352	Right-handed alpha
Helix 64	AH1	C	353	367	Right-handed alpha
Helix 65	AH2	C	397	403	Right-handed alpha
Helix 66	AH3	C	415	420	Right-handed 310
Helix 67	AH4	C	443	461	Right-handed alpha
Helix 68	AH5	D	31	37	Right-handed alpha
Helix 69	AH6	D	49	55	Right-handed 310
Helix 70	AH7	D	56	69	Right-handed alpha
Helix 71	AH8	D	86	95	Right-handed alpha
Helix 72	AH9	D	111	117	Right-handed 310
Helix 73	AI1	D	122	134	Right-handed alpha
Helix 74	AI2	D	135	137	Right-handed 310
Helix 75	AI3	D	138	165	Right-handed alpha
Helix 76	AI4	D	172	190	Right-handed alpha
Helix 77	AI5	D	213	216	Right-handed 310
Helix 78	AI6	D	217	226	Right-handed alpha
Helix 79	AI7	D	228	236	Right-handed alpha
Helix 80	AI8	D	242	259	Right-handed alpha
Helix 81	AI9	D	271	278	Right-handed alpha
Helix 82	AJ1	D	291	324	Right-handed alpha
Helix 83	AJ2	D	324	339	Right-handed alpha
Helix 84	AJ3	D	346	352	Right-handed alpha
Helix 85	AJ4	D	353	367	Right-handed alpha
Helix 86	AJ5	D	397	403	Right-handed alpha
Helix 87	AJ6	D	415	420	Right-handed 310
Helix 88	AJ7	D	443	461	Right-handed alpha

There are 12 sheets in PDB entry 7SV2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	76	first strand
Strand 2	A	79	84	anti-parallel
Strand 3	A	393	396	parallel
Strand 4	A	373	376	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	170	171	first strand
Strand 2	A	489	494	anti-parallel
Strand 3	A	462	465	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	381	383	first strand
Strand 2	A	386	388	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	76	first strand
Strand 2	B	79	84	anti-parallel
Strand 3	B	393	396	parallel
Strand 4	B	373	376	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	170	171	first strand
Strand 2	B	489	494	anti-parallel
Strand 3	B	462	465	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	381	383	first strand
Strand 2	B	386	388	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	71	76	first strand
Strand 2	C	79	84	anti-parallel
Strand 3	C	393	396	parallel
Strand 4	C	373	376	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	170	171	first strand
Strand 2	C	489	494	anti-parallel
Strand 3	C	462	465	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	381	383	first strand
Strand 2	C	386	388	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	71	76	first strand
Strand 2	D	79	84	anti-parallel
Strand 3	D	393	396	parallel
Strand 4	D	373	376	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	170	171	first strand
Strand 2	D	489	494	anti-parallel
Strand 3	D	462	465	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	381	383	first strand
Strand 2	D	386	388	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7SV2

Analysis of interatomic Contacts of Structural Units in PDB entry:
7SV2