Analysis of interatomic Contacts of Structural Units in PDB entry:
7SVK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SVK entry

There is 1 chain in PDB entry 7SVK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 2HIS 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 7SVK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
100 109Right-handed alpha
Helix 2
AA2
A
111 120Right-handed alpha
Helix 3
AA3
A
174 182Right-handed alpha
Helix 4
AA4
A
183 186Right-handed 310
Helix 5
AA5
A
209 213Right-handed 310
Helix 6
AA6
A
220 234Right-handed alpha
Helix 7
AA7
A
240 255Right-handed alpha
Helix 8
AA8
A
301 303Right-handed 310
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There are 4 sheets in PDB entry 7SVK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 169first strand
Strand 2
A
3 7anti-parallel
Strand 3
A
13 20anti-parallel
Strand 4
A
271 279anti-parallel
Strand 5
A
284 289anti-parallel
Strand 6
A
292 299anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 163first strand
Strand 2
A
149 155anti-parallel
Strand 3
A
138 144anti-parallel
Strand 4
A
73 79anti-parallel
Strand 5
A
61 69anti-parallel
Strand 6
A
51 58anti-parallel
Strand 7
A
27 31anti-parallel
Strand 8
A
311 314anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 97first strand
Strand 2
A
122 125parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 265first strand
Strand 2
A
268 269anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il