Analysis of interatomic Contacts of Structural Units in PDB entry:
7SVN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7SVN entry

There are 4 chains in PDB entry 7SVN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 19	HIS 864
B	PRO 20	LEU 863
C	PRO 20	HIS 864
D	ASP 19	HIS 865

There are 83 helices in PDB entry 7SVN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	42	Right-handed alpha
Helix 2	AA2	A	116	120	Right-handed 310
Helix 3	AA3	A	122	132	Right-handed alpha
Helix 4	AA4	A	243	251	Right-handed alpha
Helix 5	AA5	A	294	298	Right-handed 310
Helix 6	AA6	A	341	346	Right-handed alpha
Helix 7	AA7	A	382	384	Right-handed 310
Helix 8	AA8	A	392	403	Right-handed alpha
Helix 9	AA9	A	583	587	Right-handed 310
Helix 10	AB1	A	661	670	Right-handed alpha
Helix 11	AB2	A	686	691	Right-handed alpha
Helix 12	AB3	A	692	694	Right-handed 310
Helix 13	AB4	A	700	716	Right-handed alpha
Helix 14	AB5	A	730	743	Right-handed alpha
Helix 15	AB6	A	758	762	Right-handed 310
Helix 16	AB7	A	763	772	Right-handed alpha
Helix 17	AB8	A	773	776	Right-handed 310
Helix 18	AB9	A	777	784	Right-handed alpha
Helix 19	AC1	A	785	793	Right-handed 310
Helix 20	AC2	A	813	826	Right-handed alpha
Helix 21	AC3	A	844	863	Right-handed alpha
Helix 22	AC4	B	30	43	Right-handed alpha
Helix 23	AC5	B	116	120	Right-handed 310
Helix 24	AC6	B	122	132	Right-handed alpha
Helix 25	AC7	B	243	251	Right-handed alpha
Helix 26	AC8	B	294	298	Right-handed 310
Helix 27	AC9	B	341	346	Right-handed alpha
Helix 28	AD1	B	382	384	Right-handed 310
Helix 29	AD2	B	392	403	Right-handed alpha
Helix 30	AD3	B	583	587	Right-handed 310
Helix 31	AD4	B	661	670	Right-handed alpha
Helix 32	AD5	B	686	691	Right-handed alpha
Helix 33	AD6	B	692	694	Right-handed 310
Helix 34	AD7	B	700	716	Right-handed alpha
Helix 35	AD8	B	730	743	Right-handed alpha
Helix 36	AD9	B	758	762	Right-handed 310
Helix 37	AE1	B	763	772	Right-handed alpha
Helix 38	AE2	B	773	776	Right-handed 310
Helix 39	AE3	B	777	784	Right-handed alpha
Helix 40	AE4	B	785	793	Right-handed 310
Helix 41	AE5	B	813	827	Right-handed alpha
Helix 42	AE6	B	844	863	Right-handed alpha
Helix 43	AE7	C	30	42	Right-handed alpha
Helix 44	AE8	C	122	132	Right-handed alpha
Helix 45	AE9	C	243	251	Right-handed alpha
Helix 46	AF1	C	294	298	Right-handed 310
Helix 47	AF2	C	341	346	Right-handed alpha
Helix 48	AF3	C	382	384	Right-handed 310
Helix 49	AF4	C	392	403	Right-handed alpha
Helix 50	AF5	C	583	587	Right-handed 310
Helix 51	AF6	C	661	670	Right-handed alpha
Helix 52	AF7	C	686	691	Right-handed alpha
Helix 53	AF8	C	692	694	Right-handed 310
Helix 54	AF9	C	700	716	Right-handed alpha
Helix 55	AG1	C	730	743	Right-handed alpha
Helix 56	AG2	C	758	762	Right-handed 310
Helix 57	AG3	C	763	772	Right-handed alpha
Helix 58	AG4	C	773	776	Right-handed 310
Helix 59	AG5	C	777	784	Right-handed alpha
Helix 60	AG6	C	785	793	Right-handed 310
Helix 61	AG7	C	813	826	Right-handed alpha
Helix 62	AG8	C	844	863	Right-handed alpha
Helix 63	AG9	D	30	42	Right-handed alpha
Helix 64	AH1	D	116	120	Right-handed 310
Helix 65	AH2	D	122	132	Right-handed alpha
Helix 66	AH3	D	243	251	Right-handed alpha
Helix 67	AH4	D	294	298	Right-handed 310
Helix 68	AH5	D	341	346	Right-handed alpha
Helix 69	AH6	D	382	384	Right-handed 310
Helix 70	AH7	D	392	403	Right-handed alpha
Helix 71	AH8	D	583	587	Right-handed 310
Helix 72	AH9	D	661	670	Right-handed alpha
Helix 73	AI1	D	686	691	Right-handed alpha
Helix 74	AI2	D	692	694	Right-handed 310
Helix 75	AI3	D	700	716	Right-handed alpha
Helix 76	AI4	D	730	743	Right-handed alpha
Helix 77	AI5	D	758	762	Right-handed 310
Helix 78	AI6	D	763	772	Right-handed alpha
Helix 79	AI7	D	773	776	Right-handed 310
Helix 80	AI8	D	777	784	Right-handed alpha
Helix 81	AI9	D	785	793	Right-handed 310
Helix 82	AJ1	D	813	826	Right-handed alpha
Helix 83	AJ2	D	844	863	Right-handed alpha

There are 44 sheets in PDB entry 7SVN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	60	first strand
Strand 2	A	68	76	anti-parallel
Strand 3	A	85	92	anti-parallel
Strand 4	A	106	107	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	145	first strand
Strand 2	A	150	155	anti-parallel
Strand 3	A	158	163	anti-parallel
Strand 4	A	178	179	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	193	first strand
Strand 2	A	200	205	anti-parallel
Strand 3	A	208	213	anti-parallel
Strand 4	A	219	221	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	237	239	first strand
Strand 2	A	271	281	anti-parallel
Strand 3	A	256	258	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	237	239	first strand
Strand 2	A	271	281	anti-parallel
Strand 3	A	314	324	anti-parallel
Strand 4	A	330	338	anti-parallel
Strand 5	A	386	388	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	287	291	first strand
Strand 2	A	300	304	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	351	357	first strand
Strand 2	A	364	369	anti-parallel
Strand 3	A	375	381	anti-parallel
Strand 4	A	410	416	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	427	429	first strand
Strand 2	A	438	445	anti-parallel
Strand 3	A	453	460	anti-parallel
Strand 4	A	483	488	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	505	507	first strand
Strand 2	A	512	517	anti-parallel
Strand 3	A	526	531	anti-parallel
Strand 4	A	539	540	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	547	552	first strand
Strand 2	A	558	564	anti-parallel
Strand 3	A	571	578	anti-parallel
Strand 4	A	588	596	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	609	614	first strand
Strand 2	A	620	626	anti-parallel
Strand 3	A	673	678	anti-parallel
Strand 4	A	637	642	parallel
Strand 5	A	719	729	parallel
Strand 6	A	749	753	parallel
Strand 7	A	800	805	parallel
Strand 8	A	831	835	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	60	first strand
Strand 2	B	68	76	anti-parallel
Strand 3	B	85	92	anti-parallel
Strand 4	B	106	107	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	145	first strand
Strand 2	B	150	155	anti-parallel
Strand 3	B	158	163	anti-parallel
Strand 4	B	178	179	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	193	first strand
Strand 2	B	200	205	anti-parallel
Strand 3	B	208	213	anti-parallel
Strand 4	B	219	221	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	237	239	first strand
Strand 2	B	271	281	anti-parallel
Strand 3	B	256	258	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	237	239	first strand
Strand 2	B	271	281	anti-parallel
Strand 3	B	314	324	anti-parallel
Strand 4	B	330	338	anti-parallel
Strand 5	B	386	388	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	287	291	first strand
Strand 2	B	300	304	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	351	357	first strand
Strand 2	B	364	369	anti-parallel
Strand 3	B	375	381	anti-parallel
Strand 4	B	410	416	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	427	429	first strand
Strand 2	B	438	445	anti-parallel
Strand 3	B	453	460	anti-parallel
Strand 4	B	483	488	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	505	507	first strand
Strand 2	B	512	517	anti-parallel
Strand 3	B	526	531	anti-parallel
Strand 4	B	539	540	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	547	552	first strand
Strand 2	B	558	564	anti-parallel
Strand 3	B	571	578	anti-parallel
Strand 4	B	588	596	anti-parallel

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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	609	614	first strand
Strand 2	B	620	626	anti-parallel
Strand 3	B	673	678	anti-parallel
Strand 4	B	637	642	parallel
Strand 5	B	719	729	parallel
Strand 6	B	749	753	parallel
Strand 7	B	800	805	parallel
Strand 8	B	831	835	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	60	first strand
Strand 2	C	68	76	anti-parallel
Strand 3	C	85	92	anti-parallel
Strand 4	C	106	107	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	145	first strand
Strand 2	C	150	155	anti-parallel
Strand 3	C	158	163	anti-parallel
Strand 4	C	178	179	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	193	first strand
Strand 2	C	200	205	anti-parallel
Strand 3	C	208	213	anti-parallel
Strand 4	C	219	221	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	237	239	first strand
Strand 2	C	271	281	anti-parallel
Strand 3	C	256	258	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	237	239	first strand
Strand 2	C	271	281	anti-parallel
Strand 3	C	314	324	anti-parallel
Strand 4	C	330	338	anti-parallel
Strand 5	C	386	388	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	287	291	first strand
Strand 2	C	300	304	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	351	357	first strand
Strand 2	C	364	369	anti-parallel
Strand 3	C	375	381	anti-parallel
Strand 4	C	410	416	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	427	429	first strand
Strand 2	C	438	445	anti-parallel
Strand 3	C	453	460	anti-parallel
Strand 4	C	483	488	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	505	507	first strand
Strand 2	C	512	517	anti-parallel
Strand 3	C	526	531	anti-parallel
Strand 4	C	539	540	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	547	552	first strand
Strand 2	C	558	564	anti-parallel
Strand 3	C	571	578	anti-parallel
Strand 4	C	588	596	anti-parallel

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There are 8 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	609	614	first strand
Strand 2	C	620	626	anti-parallel
Strand 3	C	673	678	anti-parallel
Strand 4	C	637	642	parallel
Strand 5	C	719	729	parallel
Strand 6	C	749	753	parallel
Strand 7	C	800	805	parallel
Strand 8	C	831	835	parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	60	first strand
Strand 2	D	68	76	anti-parallel
Strand 3	D	85	92	anti-parallel
Strand 4	D	106	107	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	143	145	first strand
Strand 2	D	150	155	anti-parallel
Strand 3	D	158	163	anti-parallel
Strand 4	D	178	179	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	193	first strand
Strand 2	D	200	205	anti-parallel
Strand 3	D	208	213	anti-parallel
Strand 4	D	219	221	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	237	239	first strand
Strand 2	D	271	281	anti-parallel
Strand 3	D	256	258	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	237	239	first strand
Strand 2	D	271	281	anti-parallel
Strand 3	D	314	324	anti-parallel
Strand 4	D	330	338	anti-parallel
Strand 5	D	386	388	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	287	291	first strand
Strand 2	D	300	304	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	351	357	first strand
Strand 2	D	364	369	anti-parallel
Strand 3	D	375	381	anti-parallel
Strand 4	D	410	416	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	427	429	first strand
Strand 2	D	438	445	anti-parallel
Strand 3	D	453	460	anti-parallel
Strand 4	D	483	488	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	505	507	first strand
Strand 2	D	512	517	anti-parallel
Strand 3	D	526	531	anti-parallel
Strand 4	D	539	540	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	547	552	first strand
Strand 2	D	558	564	anti-parallel
Strand 3	D	571	578	anti-parallel
Strand 4	D	588	596	anti-parallel

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There are 8 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	609	614	first strand
Strand 2	D	620	626	anti-parallel
Strand 3	D	673	678	anti-parallel
Strand 4	D	637	642	parallel
Strand 5	D	719	729	parallel
Strand 6	D	749	753	parallel
Strand 7	D	800	805	parallel
Strand 8	D	831	835	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7SVN

Analysis of interatomic Contacts of Structural Units in PDB entry:
7SVN