Analysis of interatomic Contacts of Structural Units in PDB entry:
7SXF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SXF entry

There are 3 chains in PDB entry 7SXF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 101SER 278
A
 ILE 280ARG 445
B
 LEU 383VAL 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7SXF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
158 167Right-handed alpha
Helix 2
AA2
A
202 212Right-handed alpha
Helix 3
AA3
A
217 238Right-handed alpha
Helix 4
AA4
A
246 248Right-handed 310
Helix 5
AA5
A
263 267Right-handed 310
Helix 6
AA6
A
282 286Right-handed 310
Helix 7
AA7
A
287 292Right-handed alpha
Helix 8
AA8
A
299 316Right-handed alpha
Helix 9
AA9
A
324 337Right-handed alpha
Helix 10
AB1
A
340 348Right-handed alpha
Helix 11
AB2
A
349 352Right-handed 310
Helix 12
AB3
A
363 367Right-handed 310
Helix 13
AB4
A
373 384Right-handed alpha
Helix 14
AB5
A
387 391Right-handed 310
Helix 15
AB6
A
393 399Right-handed alpha
Helix 16
AB7
A
400 402Right-handed 310
Helix 17
AB8
A
403 408Right-handed alpha
Helix 18
AB9
A
428 432Right-handed 310
Helix 19
AC1
A
433 435Right-handed 310
Helix 20
AC2
A
436 441Right-handed alpha
Helix 21
AC3
B
384 398Right-handed alpha
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There are 2 sheets in PDB entry 7SXF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 118first strand
Strand 2
A
102 107anti-parallel
Strand 3
A
175 182anti-parallel
Strand 4
A
189 196anti-parallel
Strand 5
A
144 152anti-parallel
Strand 6
A
132 137anti-parallel
Strand 7
A
120 126anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
250 252anti-parallel
Strand 3
A
259 261anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il