Analysis of interatomic Contacts of Structural Units in PDB entry:
7SZ5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7SZ5 entry

There are 4 chains in PDB entry 7SZ5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 1	THR 614
C	VAL 1	ALA 50
B	LEU 1	VAL 500
D	VAL 1	ALA 50

There are 22 helices in PDB entry 7SZ5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	32	Right-handed alpha
Helix 2	AA2	A	88	91	Right-handed 310
Helix 3	AA3	A	134	138	Right-handed 310
Helix 4	AA4	A	139	144	Right-handed alpha
Helix 5	AA5	A	147	151	Right-handed 310
Helix 6	AA6	A	170	174	Right-handed 310
Helix 7	AA7	A	366	374	Right-handed 310
Helix 8	AA8	A	407	410	Right-handed 310
Helix 9	AA9	A	446	450	Right-handed 310
Helix 10	AB1	A	452	457	Right-handed alpha
Helix 11	AB2	A	471	476	Right-handed alpha
Helix 12	AB3	A	551	555	Right-handed 310
Helix 13	AB4	A	607	611	Right-handed 310
Helix 14	AB5	B	19	31	Right-handed alpha
Helix 15	AB6	B	53	57	Right-handed 310
Helix 16	AB7	B	146	151	Right-handed 310
Helix 17	AB8	B	170	174	Right-handed 310
Helix 18	AB9	B	331	335	Right-handed 310
Helix 19	AC1	B	364	368	Right-handed 310
Helix 20	AC2	B	407	411	Right-handed 310
Helix 21	AC3	B	452	456	Right-handed 310
Helix 22	AC4	B	475	479	Right-handed 310

There are 23 sheets in PDB entry 7SZ5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	17	first strand
Strand 2	C	33	34	parallel
Strand 3	C	19	20	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	68	first strand
Strand 2	A	93	98	parallel
Strand 3	A	123	126	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	83	first strand
Strand 2	A	118	119	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	262	first strand
Strand 2	A	267	268	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	276	277	first strand
Strand 2	A	283	284	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	314	first strand
Strand 2	A	340	342	parallel
Strand 3	A	376	377	parallel
Strand 4	A	401	402	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	345	347	first strand
Strand 2	A	381	383	parallel
Strand 3	A	412	417	parallel
Strand 4	A	436	440	parallel
Strand 5	A	464	465	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	505	507	first strand
Strand 2	A	510	512	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	525	527	first strand
Strand 2	A	530	532	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	573	576	first strand
Strand 2	A	582	584	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	586	587	first strand
Strand 2	A	593	594	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	6	first strand
Strand 2	C	23	24	anti-parallel
Strand 3	C	29	30	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	39	first strand
Strand 2	C	45	46	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	7	first strand
Strand 2	B	36	37	parallel
Strand 3	B	60	61	parallel
Strand 4	B	82	83	parallel
Strand 5	B	118	119	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	17	first strand
Strand 2	D	33	34	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	44	first strand
Strand 2	B	65	68	parallel
Strand 3	B	93	98	parallel
Strand 4	B	123	126	parallel
Strand 5	B	153	154	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	244	246	first strand
Strand 2	B	253	255	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	262	first strand
Strand 2	B	267	268	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	276	277	first strand
Strand 2	B	283	284	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	291	295	first strand
Strand 2	B	300	304	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	340	341	first strand
Strand 2	B	376	377	parallel
Strand 3	B	401	402	parallel
Strand 4	B	431	432	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	347	first strand
Strand 2	B	381	383	parallel
Strand 3	B	414	416	parallel
Strand 4	B	437	438	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	7	first strand
Strand 2	D	22	24	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7SZ5

Analysis of interatomic Contacts of Structural Units in PDB entry:
7SZ5