Analysis of interatomic Contacts of Structural Units in PDB entry:
7SZO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SZO entry

There are 10 chains in PDB entry 7SZO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
GLY 1GLU 205
E
ALA 1GLN 154
F
ALA 1GLN 154
G
ALA 1SER 144
H
PHE 1GLN 279
I
GLY 1GLU 205
K
ALA 1GLN 154
L
ALA 1GLN 154
M
ALA 1SER 144
N
PHE 1GLN 279
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7SZO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
C
124 131Right-handed 310
Helix 2
AA2
E
31 35Right-handed 310
Helix 3
AA3
F
20 22Right-handed 310
Helix 4
AA4
G
33 35Right-handed 310
Helix 5
AA5
H
66 69Right-handed 310
Helix 6
AA6
I
123 127Right-handed 310
Helix 7
AA7
K
29 34Right-handed alpha
Helix 8
AA8
K
108 112Right-handed 310
Helix 9
AA9
L
20 22Right-handed 310
Helix 10
AB1
L
33 37Right-handed 310
Helix 11
AB2
L
108 112Right-handed 310
Helix 12
AB3
M
33 35Right-handed 310
Helix 13
AB4
N
66 69Right-handed 310
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There are 41 sheets in PDB entry 7SZO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
2 4first strand
Strand 2
C
18 24anti-parallel
Strand 3
C
61 69anti-parallel
Strand 4
C
48 51anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
8 12first strand
Strand 2
C
102 116parallel
Strand 3
E
23 24anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
54 58first strand
Strand 2
C
30 39anti-parallel
Strand 3
C
81 91anti-parallel
Strand 4
C
102 116anti-parallel
Strand 5
E
145 153parallel
Strand 6
E
62 68anti-parallel
Strand 7
E
114 116anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
132 136first strand
Strand 2
C
139 144anti-parallel
Strand 3
C
171 176anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
160 161first strand
Strand 2
C
150 157anti-parallel
Strand 3
C
165 167anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
160 161first strand
Strand 2
C
150 157anti-parallel
Strand 3
C
185 189anti-parallel
Strand 4
C
200 201anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
24 33first strand
Strand 2
E
4 12parallel
Strand 3
F
141 153anti-parallel
Strand 4
F
62 68anti-parallel
Strand 5
F
115 116anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
16 20first strand
Strand 2
E
47 56anti-parallel
Strand 3
E
123 133anti-parallel
Strand 4
E
91 96anti-parallel
Strand 5
E
79 80anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
22 31first strand
Strand 2
F
3 12parallel
Strand 3
G
131 144anti-parallel
Strand 4
G
60 66anti-parallel
Strand 5
G
101 105anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
16 18first strand
Strand 2
F
47 56anti-parallel
Strand 3
F
123 133anti-parallel
Strand 4
F
91 96anti-parallel
Strand 5
F
79 80anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
167 171first strand
Strand 2
G
3 11parallel
Strand 3
H
266 278anti-parallel
Strand 4
H
191 198anti-parallel
Strand 5
H
238 243anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
17 18first strand
Strand 2
G
45 52anti-parallel
Strand 3
G
112 123anti-parallel
Strand 4
G
40 41anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
17 18first strand
Strand 2
G
45 52anti-parallel
Strand 3
G
112 123anti-parallel
Strand 4
G
85 90anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
10 11first strand
Strand 2
H
2 5anti-parallel
Strand 3
H
42 45anti-parallel
Strand 4
H
101 102anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
17 22first strand
Strand 2
H
141 150parallel
Strand 3
H
125 135anti-parallel
Strand 4
H
63 64anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
17 22first strand
Strand 2
H
141 150parallel
Strand 3
H
125 135anti-parallel
Strand 4
H
54 58anti-parallel
Strand 5
H
93 95anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
33 37first strand
Strand 2
H
105 109anti-parallel
Strand 3
H
73 77anti-parallel
Strand 4
H
80 84anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
117 120first strand
Strand 2
H
154 157anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
161 163first strand
Strand 2
H
184 187anti-parallel
Strand 3
H
248 249anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
178 180first strand
Strand 2
H
252 258anti-parallel
Strand 3
H
221 227anti-parallel
Strand 4
H
230 231anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
2 4first strand
Strand 2
I
17 24anti-parallel
Strand 3
I
61 69anti-parallel
Strand 4
I
48 51anti-parallel
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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
8 12first strand
Strand 2
I
103 116parallel
Strand 3
I
81 91anti-parallel
Strand 4
I
30 39anti-parallel
Strand 5
I
54 58anti-parallel
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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
8 12first strand
Strand 2
I
103 116parallel
Strand 3
K
145 153parallel
Strand 4
K
62 68anti-parallel
Strand 5
K
114 116anti-parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
132 136first strand
Strand 2
I
139 144anti-parallel
Strand 3
I
171 176anti-parallel
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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
160 161first strand
Strand 2
I
150 157anti-parallel
Strand 3
I
165 167anti-parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
160 161first strand
Strand 2
I
150 157anti-parallel
Strand 3
I
185 189anti-parallel
Strand 4
I
200 201anti-parallel
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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
24 31first strand
Strand 2
K
3 10parallel
Strand 3
L
142 153anti-parallel
Strand 4
L
63 68anti-parallel
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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
16 20first strand
Strand 2
K
47 56anti-parallel
Strand 3
K
123 133anti-parallel
Strand 4
K
91 96anti-parallel
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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
22 31first strand
Strand 2
L
3 12parallel
Strand 3
M
131 144anti-parallel
Strand 4
M
60 66anti-parallel
Strand 5
M
101 105anti-parallel
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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
16 18first strand
Strand 2
L
47 56anti-parallel
Strand 3
L
123 133anti-parallel
Strand 4
L
91 96anti-parallel
Strand 5
L
79 80anti-parallel
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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
167 171first strand
Strand 2
M
3 11parallel
Strand 3
N
266 278anti-parallel
Strand 4
N
191 198anti-parallel
Strand 5
N
238 243anti-parallel
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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
17 18first strand
Strand 2
M
45 52anti-parallel
Strand 3
M
112 123anti-parallel
Strand 4
M
40 41anti-parallel
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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
17 18first strand
Strand 2
M
45 52anti-parallel
Strand 3
M
112 123anti-parallel
Strand 4
M
85 90anti-parallel
Strand 5
M
75 76anti-parallel
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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
2 5first strand
Strand 2
N
42 45anti-parallel
Strand 3
N
101 102anti-parallel
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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
17 22first strand
Strand 2
N
142 150parallel
Strand 3
N
125 135anti-parallel
Strand 4
N
63 64anti-parallel
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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
17 22first strand
Strand 2
N
142 150parallel
Strand 3
N
125 135anti-parallel
Strand 4
N
54 58anti-parallel
Strand 5
N
93 95anti-parallel
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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
33 37first strand
Strand 2
N
105 109anti-parallel
Strand 3
N
73 77anti-parallel
Strand 4
N
80 84anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
117 120first strand
Strand 2
N
154 157anti-parallel
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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
161 163first strand
Strand 2
N
184 187anti-parallel
Strand 3
N
248 249anti-parallel
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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
178 180first strand
Strand 2
N
252 258anti-parallel
Strand 3
N
221 227anti-parallel
Strand 4
N
208 209anti-parallel
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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
178 180first strand
Strand 2
N
252 258anti-parallel
Strand 3
N
221 227anti-parallel
Strand 4
N
230 231anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il