Analysis of interatomic Contacts of Structural Units in PDB entry:
7SZV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SZV entry

There are 2 chains in PDB entry 7SZV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 9LEU 386
B
 THR 9LEU 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7SZV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 28Right-handed alpha
Helix 2
AA2
A
28 40Right-handed alpha
Helix 3
AA3
A
43 54Right-handed alpha
Helix 4
AA4
A
55 58Right-handed 310
Helix 5
AA5
A
61 65Right-handed 310
Helix 6
AA6
A
70 83Right-handed alpha
Helix 7
AA7
A
85 99Right-handed alpha
Helix 8
AA8
A
99 107Right-handed alpha
Helix 9
AA9
A
108 121Right-handed alpha
Helix 10
AB1
A
237 245Right-handed alpha
Helix 11
AB2
A
245 275Right-handed alpha
Helix 12
AB3
A
285 315Right-handed alpha
Helix 13
AB4
A
319 346Right-handed alpha
Helix 14
AB5
A
347 351Right-handed 310
Helix 15
AB6
A
354 363Right-handed alpha
Helix 16
AB7
A
364 368Right-handed 310
Helix 17
AB8
A
372 384Right-handed alpha
Helix 18
AB9
B
11 28Right-handed alpha
Helix 19
AC1
B
28 40Right-handed alpha
Helix 20
AC2
B
43 54Right-handed alpha
Helix 21
AC3
B
55 58Right-handed 310
Helix 22
AC4
B
61 65Right-handed 310
Helix 23
AC5
B
70 83Right-handed alpha
Helix 24
AC6
B
85 99Right-handed alpha
Helix 25
AC7
B
100 107Right-handed alpha
Helix 26
AC8
B
108 121Right-handed alpha
Helix 27
AC9
B
237 244Right-handed alpha
Helix 28
AD1
B
245 275Right-handed alpha
Helix 29
AD2
B
285 315Right-handed alpha
Helix 30
AD3
B
319 345Right-handed alpha
Helix 31
AD4
B
346 351Right-handed 310
Helix 32
AD5
B
354 363Right-handed alpha
Helix 33
AD6
B
364 368Right-handed 310
Helix 34
AD7
B
372 384Right-handed alpha
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There are 6 sheets in PDB entry 7SZV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 129first strand
Strand 2
A
170 178parallel
Strand 3
A
188 194anti-parallel
Strand 4
A
231 232anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 149first strand
Strand 2
A
152 163anti-parallel
Strand 3
A
216 227anti-parallel
Strand 4
A
200 202anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
276 277first strand
Strand 2
A
280 281anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 129first strand
Strand 2
B
170 177parallel
Strand 3
B
189 194anti-parallel
Strand 4
B
231 232anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 149first strand
Strand 2
B
152 163anti-parallel
Strand 3
B
216 227anti-parallel
Strand 4
B
200 202anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
276 277first strand
Strand 2
B
280 281anti-parallel
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