Analysis of interatomic Contacts of Structural Units in PDB entry:
7T0L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7T0L entry

There are 9 chains in PDB entry 7T0L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 1	PRO 276
B	ILE 1	MET 99
C	PHE 1	ARG 9
D	GLY 1	PRO 276
E	ILE 1	MET 99
F	PHE 1	ARG 9
G	VAL 1	PRO 218
H	VAL 1	LYS 215
K	SER 2	TYR 51

There are 26 helices in PDB entry 7T0L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	56	85	Right-handed alpha
Helix 2	AA2	A	139	150	Right-handed alpha
Helix 3	AA3	A	151	162	Right-handed alpha
Helix 4	AA4	A	162	175	Right-handed alpha
Helix 5	AA5	A	175	180	Right-handed alpha
Helix 6	AA6	A	252	255	Right-handed 310
Helix 7	AA7	D	56	85	Right-handed alpha
Helix 8	AA8	D	137	150	Right-handed alpha
Helix 9	AA9	D	152	162	Right-handed alpha
Helix 10	AB1	D	162	175	Right-handed alpha
Helix 11	AB2	D	175	180	Right-handed alpha
Helix 12	AB3	D	224	226	Right-handed 310
Helix 13	AB4	D	252	255	Right-handed 310
Helix 14	AB5	G	60	63	Right-handed 310
Helix 15	AB6	G	72	74	Right-handed 310
Helix 16	AB7	G	85	89	Right-handed 310
Helix 17	AB8	H	60	63	Right-handed 310
Helix 18	AB9	H	85	89	Right-handed 310
Helix 19	AC1	H	162	164	Right-handed 310
Helix 20	AC2	H	206	209	Right-handed 310
Helix 21	AC3	K	80	84	Right-handed 310
Helix 22	AC4	K	123	130	Right-handed alpha
Helix 23	AC5	K	185	191	Right-handed alpha
Helix 24	AC6	L	80	84	Right-handed 310
Helix 25	AC7	L	125	130	Right-handed alpha
Helix 26	AC8	L	185	189	Right-handed alpha

There are 33 sheets in PDB entry 7T0L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	47	first strand
Strand 2	A	31	37	anti-parallel
Strand 3	A	21	28	anti-parallel
Strand 4	A	3	12	anti-parallel
Strand 5	A	94	103	anti-parallel
Strand 6	A	109	118	anti-parallel
Strand 7	A	121	126	anti-parallel
Strand 8	A	133	135	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	195	first strand
Strand 2	A	198	208	anti-parallel
Strand 3	A	241	250	anti-parallel
Strand 4	A	228	230	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	195	first strand
Strand 2	A	198	208	anti-parallel
Strand 3	A	241	250	anti-parallel
Strand 4	A	234	235	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	223	first strand
Strand 2	A	214	219	anti-parallel
Strand 3	A	257	262	anti-parallel
Strand 4	A	270	272	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	11	first strand
Strand 2	B	21	30	anti-parallel
Strand 3	B	62	70	anti-parallel
Strand 4	B	50	51	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	11	first strand
Strand 2	B	21	30	anti-parallel
Strand 3	B	62	70	anti-parallel
Strand 4	B	55	56	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	45	first strand
Strand 2	B	35	41	anti-parallel
Strand 3	B	78	84	anti-parallel
Strand 4	B	91	94	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	47	first strand
Strand 2	D	31	37	anti-parallel
Strand 3	D	21	28	anti-parallel
Strand 4	D	3	12	anti-parallel
Strand 5	D	94	103	anti-parallel
Strand 6	D	109	118	anti-parallel
Strand 7	D	122	125	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	195	first strand
Strand 2	D	198	208	anti-parallel
Strand 3	D	241	250	anti-parallel
Strand 4	D	228	230	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	195	first strand
Strand 2	D	198	208	anti-parallel
Strand 3	D	241	250	anti-parallel
Strand 4	D	234	235	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	213	219	first strand
Strand 2	D	257	263	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	6	11	first strand
Strand 2	E	21	30	anti-parallel
Strand 3	E	62	70	anti-parallel
Strand 4	E	50	51	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	6	11	first strand
Strand 2	E	21	30	anti-parallel
Strand 3	E	62	70	anti-parallel
Strand 4	E	55	56	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	45	first strand
Strand 2	E	35	41	anti-parallel
Strand 3	E	78	84	anti-parallel
Strand 4	E	91	94	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	2	6	first strand
Strand 2	G	15	24	anti-parallel
Strand 3	G	76	84	anti-parallel
Strand 4	G	66	71	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	11	first strand
Strand 2	G	113	117	parallel
Strand 3	G	90	96	anti-parallel
Strand 4	G	33	38	anti-parallel
Strand 5	G	45	50	anti-parallel
Strand 6	G	56	58	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	11	first strand
Strand 2	G	113	117	parallel
Strand 3	G	90	96	anti-parallel
Strand 4	G	108	109	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	126	130	first strand
Strand 2	G	141	151	anti-parallel
Strand 3	G	181	190	anti-parallel
Strand 4	G	169	176	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	157	160	first strand
Strand 2	G	200	205	anti-parallel
Strand 3	G	210	215	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	2	6	first strand
Strand 2	H	17	24	anti-parallel
Strand 3	H	76	81	anti-parallel
Strand 4	H	66	71	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	11	first strand
Strand 2	H	113	117	parallel
Strand 3	H	90	96	anti-parallel
Strand 4	H	33	38	anti-parallel
Strand 5	H	45	50	anti-parallel
Strand 6	H	56	58	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	11	first strand
Strand 2	H	113	117	parallel
Strand 3	H	90	96	anti-parallel
Strand 4	H	108	109	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	126	130	first strand
Strand 2	H	141	151	anti-parallel
Strand 3	H	181	190	anti-parallel
Strand 4	H	169	176	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	157	160	first strand
Strand 2	H	201	205	anti-parallel
Strand 3	H	210	214	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	5	8	first strand
Strand 2	K	20	30	anti-parallel
Strand 3	K	69	76	anti-parallel
Strand 4	K	63	67	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	11	15	first strand
Strand 2	K	104	109	parallel
Strand 3	K	86	91	anti-parallel
Strand 4	K	34	39	anti-parallel
Strand 5	K	46	50	anti-parallel
Strand 6	K	54	55	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	118	120	first strand
Strand 2	K	135	141	anti-parallel
Strand 3	K	175	184	anti-parallel
Strand 4	K	131	133	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	118	120	first strand
Strand 2	K	135	141	anti-parallel
Strand 3	K	175	184	anti-parallel
Strand 4	K	161	165	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	155	156	first strand
Strand 2	K	147	152	anti-parallel
Strand 3	K	194	199	anti-parallel
Strand 4	K	209	211	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	5	8	first strand
Strand 2	L	20	30	anti-parallel
Strand 3	L	63	76	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	15	first strand
Strand 2	L	104	109	parallel
Strand 3	L	86	91	anti-parallel
Strand 4	L	34	39	anti-parallel
Strand 5	L	45	50	anti-parallel
Strand 6	L	54	55	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	116	120	first strand
Strand 2	L	131	141	anti-parallel
Strand 3	L	175	184	anti-parallel
Strand 4	L	161	165	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	155	157	first strand
Strand 2	L	147	152	anti-parallel
Strand 3	L	194	199	anti-parallel
Strand 4	L	207	211	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7T0L

Analysis of interatomic Contacts of Structural Units in PDB entry:
7T0L