Analysis of interatomic Contacts of Structural Units in PDB entry:
7T1C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7T1C entry

There is 1 chain in PDB entry 7T1C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2GLY 463
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7T1C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 8Right-handed alpha
Helix 2
AA2
A
13 21Right-handed alpha
Helix 3
AA3
A
37 49Right-handed alpha
Helix 4
AA4
A
63 68Right-handed 310
Helix 5
AA5
A
79 83Right-handed 310
Helix 6
AA6
A
93 95Right-handed 310
Helix 7
AA7
A
105 114Right-handed alpha
Helix 8
AA8
A
115 120Right-handed 310
Helix 9
AA9
A
134 139Right-handed alpha
Helix 10
AB1
A
147 155Right-handed alpha
Helix 11
AB2
A
177 190Right-handed alpha
Helix 12
AB3
A
208 228Right-handed alpha
Helix 13
AB4
A
241 258Right-handed alpha
Helix 14
AB5
A
259 260Right-handed 310
Helix 15
AB6
A
261 263Right-handed 310
Helix 16
AB7
A
271 275Right-handed alpha
Helix 17
AB8
A
275 286Right-handed alpha
Helix 18
AB9
A
298 303Right-handed alpha
Helix 19
AC1
A
311 323Right-handed alpha
Helix 20
AC2
A
340 342Right-handed 310
Helix 21
AC3
A
343 352Right-handed alpha
Helix 22
AC4
A
379 391Right-handed alpha
Helix 23
AC5
A
400 405Right-handed alpha
Helix 24
AC6
A
409 427Right-handed alpha
Helix 25
AC7
A
429 436Right-handed alpha
Helix 26
AC8
A
437 447Right-handed alpha
Helix 27
AC9
A
447 455Right-handed alpha
Helix 28
AD1
A
457 463Right-handed alpha
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There are 3 sheets in PDB entry 7T1C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 75first strand
Strand 2
A
84 91anti-parallel
Strand 3
A
23 32anti-parallel
Strand 4
A
123 132anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 169first strand
Strand 2
A
194 196parallel
Strand 3
A
232 236parallel
Strand 4
A
265 270parallel
Strand 5
A
291 294parallel
Strand 6
A
326 328parallel
Strand 7
A
371 375parallel
Strand 8
A
396 398parallel
Strand 9
A
165 169parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 356first strand
Strand 2
A
361 363anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il