Analysis of interatomic Contacts of Structural Units in PDB entry:
7T1G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7T1G entry

There are 2 chains in PDB entry 7T1G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 6SER 360
B
 ARG 3SER 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7T1G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 67Right-handed alpha
Helix 2
AA2
A
70 72Right-handed 310
Helix 3
AA3
A
81 86Right-handed alpha
Helix 4
AA4
A
86 94Right-handed alpha
Helix 5
AA5
A
104 120Right-handed alpha
Helix 6
AA6
A
145 149Right-handed alpha
Helix 7
AA7
A
180 193Right-handed alpha
Helix 8
AA8
A
196 207Right-handed alpha
Helix 9
AA9
A
208 212Right-handed 310
Helix 10
AB1
A
216 220Right-handed alpha
Helix 11
AB2
A
224 228Right-handed 310
Helix 12
AB3
A
263 271Right-handed alpha
Helix 13
AB4
A
275 303Right-handed alpha
Helix 14
AB5
A
317 332Right-handed alpha
Helix 15
AB6
A
343 345Right-handed 310
Helix 16
AB7
A
346 360Right-handed alpha
Helix 17
AB8
B
55 67Right-handed alpha
Helix 18
AB9
B
81 86Right-handed alpha
Helix 19
AC1
B
86 94Right-handed alpha
Helix 20
AC2
B
104 120Right-handed alpha
Helix 21
AC3
B
180 193Right-handed alpha
Helix 22
AC4
B
196 207Right-handed alpha
Helix 23
AC5
B
208 212Right-handed 310
Helix 24
AC6
B
216 220Right-handed alpha
Helix 25
AC7
B
276 302Right-handed alpha
Helix 26
AC8
B
317 332Right-handed alpha
Helix 27
AC9
B
343 345Right-handed 310
Helix 28
AD1
B
346 356Right-handed alpha
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There are 7 sheets in PDB entry 7T1G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 9first strand
Strand 2
A
41 48anti-parallel
Strand 3
A
29 34anti-parallel
Strand 4
A
19 25anti-parallel
Strand 5
A
74 79parallel
Strand 6
A
99 102parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 136first strand
Strand 2
A
124 128anti-parallel
Strand 3
A
337 341anti-parallel
Strand 4
A
306 311parallel
Strand 5
A
151 156parallel
Strand 6
A
160 167anti-parallel
Strand 7
A
170 177anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 215first strand
Strand 2
A
234 236anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 262first strand
Strand 2
B
273 275anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 9first strand
Strand 2
B
41 47anti-parallel
Strand 3
B
30 34anti-parallel
Strand 4
B
19 25anti-parallel
Strand 5
B
74 79parallel
Strand 6
B
99 102parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 135first strand
Strand 2
B
124 128anti-parallel
Strand 3
B
337 341anti-parallel
Strand 4
B
306 311parallel
Strand 5
B
151 156parallel
Strand 6
B
160 167anti-parallel
Strand 7
B
170 177anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 215first strand
Strand 2
B
234 236anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il