Analysis of interatomic Contacts of Structural Units in PDB entry:
7T28


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7T28 entry

There is 1 chain in PDB entry 7T28 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6TYR 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 7T28. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 51Right-handed alpha
Helix 2
AA2
A
54 58Right-handed 310
Helix 3
AA3
A
67 72Right-handed alpha
Helix 4
AA4
A
73 84Right-handed alpha
Helix 5
AA5
A
99 104Right-handed alpha
Helix 6
AA6
A
121 125Right-handed 310
Helix 7
AA7
A
211 217Right-handed alpha
Helix 8
AA8
A
222 225Right-handed 310
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There are 2 sheets in PDB entry 7T28. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 12first strand
Strand 2
A
25 29anti-parallel
Strand 3
A
35 38anti-parallel
Strand 4
A
60 62parallel
Strand 5
A
91 95parallel
Strand 6
A
127 131parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 142first strand
Strand 2
A
147 154anti-parallel
Strand 3
A
162 169anti-parallel
Strand 4
A
172 177anti-parallel
Strand 5
A
196 200parallel
Strand 6
A
227 230parallel
Strand 7
A
247 248parallel
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