Analysis of interatomic Contacts of Structural Units in PDB entry:
7T29


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7T29 entry

There is 1 chain in PDB entry 7T29 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -5ILE 456
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7T29. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 21Right-handed alpha
Helix 2
AA2
A
23 28Right-handed alpha
Helix 3
AA3
A
28 50Right-handed alpha
Helix 4
AA4
A
60 73Right-handed alpha
Helix 5
AA5
A
75 90Right-handed alpha
Helix 6
AA6
A
91 105Right-handed alpha
Helix 7
AA7
A
107 112Right-handed alpha
Helix 8
AA8
A
113 117Right-handed 310
Helix 9
AA9
A
122 142Right-handed alpha
Helix 10
AB1
A
142 161Right-handed alpha
Helix 11
AB2
A
180 201Right-handed alpha
Helix 12
AB3
A
214 221Right-handed alpha
Helix 13
AB4
A
225 236Right-handed alpha
Helix 14
AB5
A
252 282Right-handed alpha
Helix 15
AB6
A
305 329Right-handed alpha
Helix 16
AB7
A
338 345Right-handed alpha
Helix 17
AB8
A
346 367Right-handed alpha
Helix 18
AB9
A
371 381Right-handed alpha
Helix 19
AC1
A
382 385Right-handed 310
Helix 20
AC2
A
386 397Right-handed alpha
Helix 21
AC3
A
401 411Right-handed alpha
Helix 22
AC4
A
416 427Right-handed alpha
Helix 23
AC5
A
430 440Right-handed alpha
Helix 24
AC6
A
448 455Right-handed alpha
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There are 3 sheets in PDB entry 7T29. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 170first strand
Strand 2
A
173 179anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 205first strand
Strand 2
A
241 242parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 287first strand
Strand 2
A
368 370anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il