Analysis of interatomic Contacts of Structural Units in PDB entry:
7T38

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7T38 entry

There are 4 chains in PDB entry 7T38 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 74	PRO 729
B	ARG 74	PRO 729
C	ARG 74	PRO 729
D	ARG 74	PRO 729

There are112 helices in PDB entry 7T38. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	76	87	Right-handed alpha
Helix 2	AA2	A	89	93	Right-handed 310
Helix 3	AA3	A	94	103	Right-handed alpha
Helix 4	AA4	A	108	112	Right-handed 310
Helix 5	AA5	A	119	127	Right-handed alpha
Helix 6	AA6	A	135	147	Right-handed alpha
Helix 7	AA7	A	166	174	Right-handed alpha
Helix 8	AA8	A	176	185	Right-handed alpha
Helix 9	AA9	A	212	220	Right-handed alpha
Helix 10	AB1	A	222	231	Right-handed alpha
Helix 11	AB2	A	248	256	Right-handed alpha
Helix 12	AB3	A	260	282	Right-handed alpha
Helix 13	AB4	A	286	290	Right-handed 310
Helix 14	AB5	A	297	306	Right-handed alpha
Helix 15	AB6	A	307	316	Right-handed alpha
Helix 16	AB7	A	355	362	Right-handed alpha
Helix 17	AB8	A	370	375	Right-handed alpha
Helix 18	AB9	A	377	413	Right-handed alpha
Helix 19	AC1	A	430	459	Right-handed alpha
Helix 20	AC2	A	467	469	Right-handed 310
Helix 21	AC3	A	470	492	Right-handed alpha
Helix 22	AC4	A	496	512	Right-handed alpha
Helix 23	AC5	A	513	517	Right-handed 310
Helix 24	AC6	A	521	534	Right-handed alpha
Helix 25	AC7	A	536	558	Right-handed alpha
Helix 26	AC8	A	592	602	Right-handed alpha
Helix 27	AC9	A	618	649	Right-handed alpha
Helix 28	AD1	A	652	673	Right-handed alpha
Helix 29	AD2	B	76	87	Right-handed alpha
Helix 30	AD3	B	89	93	Right-handed 310
Helix 31	AD4	B	94	103	Right-handed alpha
Helix 32	AD5	B	108	112	Right-handed 310
Helix 33	AD6	B	119	127	Right-handed alpha
Helix 34	AD7	B	135	147	Right-handed alpha
Helix 35	AD8	B	166	174	Right-handed alpha
Helix 36	AD9	B	176	185	Right-handed alpha
Helix 37	AE1	B	212	220	Right-handed alpha
Helix 38	AE2	B	222	231	Right-handed alpha
Helix 39	AE3	B	248	256	Right-handed alpha
Helix 40	AE4	B	260	282	Right-handed alpha
Helix 41	AE5	B	286	290	Right-handed 310
Helix 42	AE6	B	297	306	Right-handed alpha
Helix 43	AE7	B	307	316	Right-handed alpha
Helix 44	AE8	B	355	362	Right-handed alpha
Helix 45	AE9	B	370	375	Right-handed alpha
Helix 46	AF1	B	377	413	Right-handed alpha
Helix 47	AF2	B	430	459	Right-handed alpha
Helix 48	AF3	B	467	469	Right-handed 310
Helix 49	AF4	B	470	492	Right-handed alpha
Helix 50	AF5	B	496	512	Right-handed alpha
Helix 51	AF6	B	513	517	Right-handed 310
Helix 52	AF7	B	521	534	Right-handed alpha
Helix 53	AF8	B	536	558	Right-handed alpha
Helix 54	AF9	B	592	602	Right-handed alpha
Helix 55	AG1	B	618	649	Right-handed alpha
Helix 56	AG2	B	652	673	Right-handed alpha
Helix 57	AG3	C	76	87	Right-handed alpha
Helix 58	AG4	C	89	93	Right-handed 310
Helix 59	AG5	C	94	103	Right-handed alpha
Helix 60	AG6	C	108	112	Right-handed 310
Helix 61	AG7	C	119	127	Right-handed alpha
Helix 62	AG8	C	135	147	Right-handed alpha
Helix 63	AG9	C	166	174	Right-handed alpha
Helix 64	AH1	C	176	185	Right-handed alpha
Helix 65	AH2	C	212	220	Right-handed alpha
Helix 66	AH3	C	222	231	Right-handed alpha
Helix 67	AH4	C	248	256	Right-handed alpha
Helix 68	AH5	C	260	282	Right-handed alpha
Helix 69	AH6	C	286	290	Right-handed 310
Helix 70	AH7	C	297	306	Right-handed alpha
Helix 71	AH8	C	307	316	Right-handed alpha
Helix 72	AH9	C	355	362	Right-handed alpha
Helix 73	AI1	C	370	375	Right-handed alpha
Helix 74	AI2	C	377	413	Right-handed alpha
Helix 75	AI3	C	430	459	Right-handed alpha
Helix 76	AI4	C	467	469	Right-handed 310
Helix 77	AI5	C	470	492	Right-handed alpha
Helix 78	AI6	C	496	512	Right-handed alpha
Helix 79	AI7	C	513	517	Right-handed 310
Helix 80	AI8	C	521	534	Right-handed alpha
Helix 81	AI9	C	536	558	Right-handed alpha
Helix 82	AJ1	C	592	602	Right-handed alpha
Helix 83	AJ2	C	618	649	Right-handed alpha
Helix 84	AJ3	C	652	673	Right-handed alpha
Helix 85	AJ4	D	76	87	Right-handed alpha
Helix 86	AJ5	D	89	93	Right-handed 310
Helix 87	AJ6	D	94	103	Right-handed alpha
Helix 88	AJ7	D	108	112	Right-handed 310
Helix 89	AJ8	D	119	127	Right-handed alpha
Helix 90	AJ9	D	135	147	Right-handed alpha
Helix 91	AK1	D	166	174	Right-handed alpha
Helix 92	AK2	D	176	185	Right-handed alpha
Helix 93	AK3	D	212	220	Right-handed alpha
Helix 94	AK4	D	222	231	Right-handed alpha
Helix 95	AK5	D	248	256	Right-handed alpha
Helix 96	AK6	D	260	282	Right-handed alpha
Helix 97	AK7	D	286	290	Right-handed 310
Helix 98	AK8	D	297	306	Right-handed alpha
Helix 99	AK9	D	307	316	Right-handed alpha
Helix 100	AL1	D	355	362	Right-handed alpha
Helix 101	AL2	D	370	375	Right-handed alpha
Helix 102	AL3	D	377	413	Right-handed alpha
Helix 103	AL4	D	430	459	Right-handed alpha
Helix 104	AL5	D	467	469	Right-handed 310
Helix 105	AL6	D	470	492	Right-handed alpha
Helix 106	AL7	D	496	512	Right-handed alpha
Helix 107	AL8	D	513	517	Right-handed 310
Helix 108	AL9	D	521	534	Right-handed alpha
Helix 109	AM1	D	536	558	Right-handed alpha
Helix 110	AM2	D	592	602	Right-handed alpha
Helix 111	AM3	D	618	649	Right-handed alpha
Helix 112	AM4	D	652	673	Right-handed alpha

There are 8 sheets in PDB entry 7T38. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	158	first strand
Strand 2	A	163	164	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	329	335	first strand
Strand 2	A	338	344	anti-parallel
Strand 3	A	701	710	anti-parallel
Strand 4	A	687	690	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	158	first strand
Strand 2	B	163	164	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	329	335	first strand
Strand 2	B	338	344	anti-parallel
Strand 3	B	701	710	anti-parallel
Strand 4	B	687	690	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	158	first strand
Strand 2	C	163	164	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	329	335	first strand
Strand 2	C	338	344	anti-parallel
Strand 3	C	701	710	anti-parallel
Strand 4	C	687	690	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	157	158	first strand
Strand 2	D	163	164	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	329	335	first strand
Strand 2	D	338	344	anti-parallel
Strand 3	D	701	710	anti-parallel
Strand 4	D	687	690	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7T38

Analysis of interatomic Contacts of Structural Units in PDB entry:
7T38