Analysis of interatomic Contacts of Structural Units in PDB entry:
7T3V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7T3V entry

There are 6 chains in PDB entry 7T3V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 85	ASP 603
B	SER 86	ASP 603
C	SER 86	ASP 603
D	ALA 85	ASP 603
E	SER 86	ASN 602
F	SER 86	ASN 602

There are112 helices in PDB entry 7T3V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	105	110	Right-handed 310
Helix 2	AA2	A	150	157	Right-handed alpha
Helix 3	AA3	A	158	163	Right-handed alpha
Helix 4	AA4	A	199	215	Right-handed alpha
Helix 5	AA5	A	231	247	Right-handed alpha
Helix 6	AA6	A	273	278	Right-handed alpha
Helix 7	AA7	A	279	300	Right-handed alpha
Helix 8	AA8	A	306	321	Right-handed alpha
Helix 9	AA9	A	329	336	Right-handed alpha
Helix 10	AB1	A	338	346	Right-handed alpha
Helix 11	AB2	A	392	399	Right-handed 310
Helix 12	AB3	A	400	417	Right-handed alpha
Helix 13	AB4	A	461	476	Right-handed alpha
Helix 14	AB5	A	490	495	Right-handed alpha
Helix 15	AB6	A	506	521	Right-handed alpha
Helix 16	AB7	A	530	538	Right-handed 310
Helix 17	AB8	A	553	564	Right-handed alpha
Helix 18	AB9	A	592	601	Right-handed alpha
Helix 19	AC1	B	105	110	Right-handed 310
Helix 20	AC2	B	150	157	Right-handed alpha
Helix 21	AC3	B	158	163	Right-handed alpha
Helix 22	AC4	B	199	216	Right-handed alpha
Helix 23	AC5	B	231	247	Right-handed alpha
Helix 24	AC6	B	273	278	Right-handed alpha
Helix 25	AC7	B	279	300	Right-handed alpha
Helix 26	AC8	B	306	322	Right-handed alpha
Helix 27	AC9	B	329	337	Right-handed alpha
Helix 28	AD1	B	338	345	Right-handed alpha
Helix 29	AD2	B	346	348	Right-handed 310
Helix 30	AD3	B	392	399	Right-handed 310
Helix 31	AD4	B	400	417	Right-handed alpha
Helix 32	AD5	B	461	476	Right-handed alpha
Helix 33	AD6	B	490	495	Right-handed alpha
Helix 34	AD7	B	506	521	Right-handed alpha
Helix 35	AD8	B	530	538	Right-handed 310
Helix 36	AD9	B	553	564	Right-handed alpha
Helix 37	AE1	B	592	602	Right-handed alpha
Helix 38	AE2	C	105	110	Right-handed 310
Helix 39	AE3	C	118	120	Right-handed 310
Helix 40	AE4	C	150	157	Right-handed alpha
Helix 41	AE5	C	158	163	Right-handed alpha
Helix 42	AE6	C	199	215	Right-handed alpha
Helix 43	AE7	C	231	247	Right-handed alpha
Helix 44	AE8	C	273	279	Right-handed alpha
Helix 45	AE9	C	279	300	Right-handed alpha
Helix 46	AF1	C	306	322	Right-handed alpha
Helix 47	AF2	C	329	336	Right-handed alpha
Helix 48	AF3	C	338	346	Right-handed alpha
Helix 49	AF4	C	392	399	Right-handed 310
Helix 50	AF5	C	400	417	Right-handed alpha
Helix 51	AF6	C	461	476	Right-handed alpha
Helix 52	AF7	C	490	495	Right-handed alpha
Helix 53	AF8	C	506	521	Right-handed alpha
Helix 54	AF9	C	530	538	Right-handed 310
Helix 55	AG1	C	553	564	Right-handed alpha
Helix 56	AG2	C	592	602	Right-handed alpha
Helix 57	AG3	D	105	110	Right-handed 310
Helix 58	AG4	D	118	120	Right-handed 310
Helix 59	AG5	D	150	157	Right-handed alpha
Helix 60	AG6	D	158	163	Right-handed alpha
Helix 61	AG7	D	199	215	Right-handed alpha
Helix 62	AG8	D	231	247	Right-handed alpha
Helix 63	AG9	D	273	278	Right-handed alpha
Helix 64	AH1	D	280	300	Right-handed alpha
Helix 65	AH2	D	306	322	Right-handed alpha
Helix 66	AH3	D	329	336	Right-handed alpha
Helix 67	AH4	D	338	346	Right-handed alpha
Helix 68	AH5	D	392	399	Right-handed 310
Helix 69	AH6	D	400	417	Right-handed alpha
Helix 70	AH7	D	460	476	Right-handed alpha
Helix 71	AH8	D	490	495	Right-handed alpha
Helix 72	AH9	D	506	521	Right-handed alpha
Helix 73	AI1	D	530	538	Right-handed 310
Helix 74	AI2	D	553	564	Right-handed alpha
Helix 75	AI3	D	592	602	Right-handed alpha
Helix 76	AI4	E	105	110	Right-handed 310
Helix 77	AI5	E	150	157	Right-handed alpha
Helix 78	AI6	E	158	163	Right-handed alpha
Helix 79	AI7	E	199	216	Right-handed alpha
Helix 80	AI8	E	231	247	Right-handed alpha
Helix 81	AI9	E	273	278	Right-handed alpha
Helix 82	AJ1	E	280	300	Right-handed alpha
Helix 83	AJ2	E	306	322	Right-handed alpha
Helix 84	AJ3	E	329	337	Right-handed alpha
Helix 85	AJ4	E	338	346	Right-handed alpha
Helix 86	AJ5	E	392	399	Right-handed 310
Helix 87	AJ6	E	400	417	Right-handed alpha
Helix 88	AJ7	E	461	476	Right-handed alpha
Helix 89	AJ8	E	490	495	Right-handed alpha
Helix 90	AJ9	E	506	521	Right-handed alpha
Helix 91	AK1	E	530	538	Right-handed 310
Helix 92	AK2	E	553	564	Right-handed alpha
Helix 93	AK3	E	592	602	Right-handed alpha
Helix 94	AK4	F	105	110	Right-handed 310
Helix 95	AK5	F	118	120	Right-handed 310
Helix 96	AK6	F	150	157	Right-handed alpha
Helix 97	AK7	F	158	163	Right-handed alpha
Helix 98	AK8	F	199	215	Right-handed alpha
Helix 99	AK9	F	231	247	Right-handed alpha
Helix 100	AL1	F	274	279	Right-handed alpha
Helix 101	AL2	F	279	300	Right-handed alpha
Helix 102	AL3	F	306	322	Right-handed alpha
Helix 103	AL4	F	329	337	Right-handed alpha
Helix 104	AL5	F	338	346	Right-handed alpha
Helix 105	AL6	F	392	399	Right-handed 310
Helix 106	AL7	F	400	417	Right-handed alpha
Helix 107	AL8	F	461	476	Right-handed alpha
Helix 108	AL9	F	490	495	Right-handed alpha
Helix 109	AM1	F	506	521	Right-handed alpha
Helix 110	AM2	F	530	538	Right-handed 310
Helix 111	AM3	F	553	564	Right-handed alpha
Helix 112	AM4	F	592	602	Right-handed alpha

There are 28 sheets in PDB entry 7T3V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	111	116	first strand
Strand 2	A	266	271	parallel
Strand 3	A	221	227	parallel
Strand 4	A	127	132	parallel
Strand 5	A	184	191	parallel
Strand 6	A	172	178	anti-parallel
Strand 7	D	172	178	parallel
Strand 8	D	184	191	anti-parallel
Strand 9	D	126	132	parallel
Strand 10	D	221	227	parallel
Strand 11	D	266	271	parallel
Strand 12	D	111	116	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	328	first strand
Strand 2	A	353	360	anti-parallel
Strand 3	A	421	432	anti-parallel
Strand 4	A	375	379	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	328	first strand
Strand 2	A	353	360	anti-parallel
Strand 3	A	421	432	anti-parallel
Strand 4	A	367	373	parallel
Strand 5	A	480	485	parallel
Strand 6	A	570	575	parallel
Strand 7	A	500	504	anti-parallel
Strand 8	A	524	526	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	444	446	first strand
Strand 2	A	452	454	anti-parallel
Strand 3	A	544	545	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	581	582	first strand
Strand 2	A	587	588	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	116	first strand
Strand 2	B	266	271	parallel
Strand 3	B	221	226	parallel
Strand 4	B	127	132	parallel
Strand 5	B	184	191	parallel
Strand 6	B	172	178	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	328	first strand
Strand 2	B	353	360	anti-parallel
Strand 3	B	421	432	anti-parallel
Strand 4	B	375	379	parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	328	first strand
Strand 2	B	353	360	anti-parallel
Strand 3	B	421	432	anti-parallel
Strand 4	B	367	373	parallel
Strand 5	B	480	485	parallel
Strand 6	B	570	575	parallel
Strand 7	B	500	504	anti-parallel
Strand 8	B	524	526	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	444	446	first strand
Strand 2	B	452	454	anti-parallel
Strand 3	B	544	545	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	581	582	first strand
Strand 2	B	587	588	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	116	first strand
Strand 2	C	266	271	parallel
Strand 3	C	221	227	parallel
Strand 4	C	127	132	parallel
Strand 5	C	184	191	parallel
Strand 6	C	172	178	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	324	328	first strand
Strand 2	C	353	360	anti-parallel
Strand 3	C	421	432	anti-parallel
Strand 4	C	375	379	parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	324	328	first strand
Strand 2	C	353	360	anti-parallel
Strand 3	C	421	432	anti-parallel
Strand 4	C	367	373	parallel
Strand 5	C	480	485	parallel
Strand 6	C	570	575	parallel
Strand 7	C	500	504	anti-parallel
Strand 8	C	524	526	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	444	446	first strand
Strand 2	C	452	454	anti-parallel
Strand 3	C	544	545	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	581	582	first strand
Strand 2	C	587	588	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	324	328	first strand
Strand 2	D	353	360	anti-parallel
Strand 3	D	421	432	anti-parallel
Strand 4	D	367	379	parallel
Strand 5	D	480	485	parallel
Strand 6	D	570	575	parallel
Strand 7	D	500	504	anti-parallel
Strand 8	D	524	526	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	444	446	first strand
Strand 2	D	452	454	anti-parallel
Strand 3	D	544	545	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	581	582	first strand
Strand 2	D	587	588	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	111	116	first strand
Strand 2	E	266	271	parallel
Strand 3	E	221	227	parallel
Strand 4	E	127	132	parallel
Strand 5	E	184	191	parallel
Strand 6	E	172	178	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	324	328	first strand
Strand 2	E	353	360	anti-parallel
Strand 3	E	422	432	anti-parallel
Strand 4	E	375	379	parallel

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	324	328	first strand
Strand 2	E	353	360	anti-parallel
Strand 3	E	422	432	anti-parallel
Strand 4	E	368	373	parallel
Strand 5	E	480	485	parallel
Strand 6	E	570	575	parallel
Strand 7	E	500	504	anti-parallel
Strand 8	E	524	526	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	444	446	first strand
Strand 2	E	452	454	anti-parallel
Strand 3	E	544	545	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	581	582	first strand
Strand 2	E	587	588	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	111	116	first strand
Strand 2	F	266	271	parallel
Strand 3	F	221	227	parallel
Strand 4	F	127	132	parallel
Strand 5	F	184	191	parallel
Strand 6	F	172	178	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	327	328	first strand
Strand 2	F	353	355	anti-parallel
Strand 3	F	421	432	anti-parallel
Strand 4	F	375	379	parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	358	360	first strand
Strand 2	F	421	432	anti-parallel
Strand 3	F	367	373	parallel
Strand 4	F	480	485	parallel
Strand 5	F	570	575	parallel
Strand 6	F	500	504	anti-parallel
Strand 7	F	524	526	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	444	446	first strand
Strand 2	F	452	454	anti-parallel
Strand 3	F	544	545	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	581	582	first strand
Strand 2	F	587	588	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7T3V

Analysis of interatomic Contacts of Structural Units in PDB entry:
7T3V