Analysis of interatomic Contacts of Structural Units in PDB entry:
7T4J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7T4J entry

There are 2 chains in PDB entry 7T4J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 701ASP 987
B
 GLN 701ASP 987
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7T4J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
757 769Right-handed alpha
Helix 2
AA2
A
800 809Right-handed alpha
Helix 3
AA3
A
810 812Right-handed 310
Helix 4
AA4
A
813 834Right-handed alpha
Helix 5
AA5
A
842 844Right-handed 310
Helix 6
AA6
A
880 884Right-handed 310
Helix 7
AA7
A
885 892Right-handed alpha
Helix 8
AA8
A
895 912Right-handed alpha
Helix 9
AA9
A
925 932Right-handed alpha
Helix 10
AB1
A
943 954Right-handed alpha
Helix 11
AB2
A
957 961Right-handed 310
Helix 12
AB3
A
963 976Right-handed alpha
Helix 13
AB4
A
977 981Right-handed 310
Helix 14
AB5
B
708 710Right-handed 310
Helix 15
AB6
B
755 769Right-handed alpha
Helix 16
AB7
B
801 808Right-handed alpha
Helix 17
AB8
B
813 834Right-handed alpha
Helix 18
AB9
B
842 844Right-handed 310
Helix 19
AC1
B
880 884Right-handed 310
Helix 20
AC2
B
885 892Right-handed alpha
Helix 21
AC3
B
895 912Right-handed alpha
Helix 22
AC4
B
922 924Right-handed 310
Helix 23
AC5
B
925 933Right-handed alpha
Helix 24
AC6
B
943 954Right-handed alpha
Helix 25
AC7
B
957 961Right-handed 310
Helix 26
AC8
B
963 976Right-handed alpha
Helix 27
AC9
B
977 982Right-handed alpha
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There are 8 sheets in PDB entry 7T4J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
706 707first strand
Strand 2
A
780 785parallel
Strand 3
A
789 794anti-parallel
Strand 4
A
740 746anti-parallel
Strand 5
A
725 731anti-parallel
Strand 6
A
712 720anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
836 837first strand
Strand 2
A
863 864anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
846 850first strand
Strand 2
A
853 856anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
872 873first strand
Strand 2
A
893 894anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
712 720first strand
Strand 2
B
725 731anti-parallel
Strand 3
B
740 746anti-parallel
Strand 4
B
790 794anti-parallel
Strand 5
B
780 784anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
799 800first strand
Strand 2
B
846 850anti-parallel
Strand 3
B
853 856anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
836 837first strand
Strand 2
B
863 864anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
872 873first strand
Strand 2
B
893 894anti-parallel
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